| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0663 |
|---|
| Symbol | |
|---|
| ID | 5693493 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | - |
|---|
| Start bp | 787789 |
|---|
| End bp | 788478 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641263255 |
|---|
| Product | lysine exporter protein LysE/YggA |
|---|
| Protein accession | YP_001528550 |
|---|
| Protein GI | 158520680 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1280] Putative threonine efflux protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.92475 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAACCT CCTTTCTCAC CATCGCATCC CTCTCCTTTG CCGTGGCCCT TACCGGCGCC
ATGGCGCCGG GACCGCTTTT GACCTACACC ATCATCCAGT CCGCGCAAAG CCGGCGGGGC
TACCTGATGG GCCTCTGGAT CATTGCCGGC CATGCCGCCA TTGAGGCGGC CATCATCGTG
CTGCTGATGG CCGGGTTCTC CTTTGTGTTA AACAGCCCGC CGGCCGTAAA AATCATCGGC
GTGGCCGGCG GTACCATGCT GGTGTGGTTC GGCATCTCCG TGATTCGCGA CATTTATCGC
CGCCACCGGC CCGGGGCCCT GAACGGCGAA ACAAGTGACA TCGCGCCCGC TCTCGCAACA
AACACCACCC TGCGCCGGCG GCTGTTGAAA AACCCGGTGT CCGGCGGGGC ACTGGTCTCC
ATGGCCAACC CTTACTGGTG GGTCTGGTGG GCCACCATCG GGCTGGCCTT CATGACCGAA
TTTGAAATCT CCTTTGCCAA CCCGGCCGGG TTTGCCGCCT TTTTTCTGGG CCACGAGGCC
GGGGACCTGG CCTGGTACCT GGTGGTCTCC ACCCTCGCCT TCTGGGGCGT TCAGAAGCTC
AACCCCAAAG TTTATGCCGC CATGCTGACC TGCTGCGGCC TTTTCATGGT GGGGTTCGGG
ATATACCTGG GCGTGTCGCC ATTCATCTGA
|
|---|
| Protein sequence | METSFLTIAS LSFAVALTGA MAPGPLLTYT IIQSAQSRRG YLMGLWIIAG HAAIEAAIIV
LLMAGFSFVL NSPPAVKIIG VAGGTMLVWF GISVIRDIYR RHRPGALNGE TSDIAPALAT
NTTLRRRLLK NPVSGGALVS MANPYWWVWW ATIGLAFMTE FEISFANPAG FAAFFLGHEA
GDLAWYLVVS TLAFWGVQKL NPKVYAAMLT CCGLFMVGFG IYLGVSPFI
|
|---|
| |