Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_0649 |
Symbol | |
ID | 5693479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 773895 |
End bp | 774821 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641263241 |
Product | ribokinase-like domain-containing protein |
Protein accession | YP_001528536 |
Protein GI | 158520666 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0524] Sugar kinases, ribokinase family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0225975 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGGTGG CTATCGGCGA GGTGTTGTTT GACGTTTTCC CCGAAGACAA GCGGATCGGC GGCGCCCCCT TTAATTTTGC CGTTCACCTG GCAAACATGG GGTTTCCCGT TCACTTTGTC ACCCGGGTGG GAAAGGATGC CAACGGCAGG GCGATTCTGG ACCTGATGCA CCGGTTCGGG CTGTCCCGCG AGAACGTTCA GATCGATCCC GAGTATGCCA CCGGCCGGGT CATGGTCCAT CCAGAGGCGG ACGGGGGCCA CCGGTTTGAT ATTGTTGCGC CGGCAGCCTA CGACTACCTG GCGTGCACCG ATCAAGTCAT GGACCTGATG CGCACCCCGC CGGACATGGT CTATTTCGGT ACCCTGGCCC AGCGGTCTGA GCAGAGCCGG CAGGCCATGG AAGAGATGTT TCAGGCGGCC CCGCCGGAAA CCCGGTTTTT CTGCGATATC AACCTTCGAC CCGGCGGCTA TGACCGGGCA ATTGTCGATG GCGCCCTGCA ACAGGCCGAC CTGCTGAAGC TCAATGACGC GGAGCTGGCC GTTATCGGAG AGATGTTTGA CATTCAAGGG GATACGGAAA CCATGATTCG CCGGCTGATG GAAGCCCGCG GGCTGGTGCT GGTGGCCCTG ACCCTGGGCA GCCGGGGCGG CCGGTTGTTT ACCCCTGACG ATCATGTCCG CATCGACCTG CCGTCCCGGT CCGCCGGTCC GCCGGTGGTG GACACCGTGG GCGCCGGTGA TGCCTTTGCC GCGGTCACGG CCGCCGGGTT CTTGCAGAAC CGTCATCTGT CAACCATTCT GGAGGCAGCC ACGGAGTTTG CCGGCCGCAT CTGCGGTATT CAGGGCGCGG TGCCCGATTC ACCCGATTTT TACAGGCAGG GTCGCCTGCC CGAATTTTTT TACAAAGACA CCGGAGAAAG CCGATGA
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Protein sequence | MVVAIGEVLF DVFPEDKRIG GAPFNFAVHL ANMGFPVHFV TRVGKDANGR AILDLMHRFG LSRENVQIDP EYATGRVMVH PEADGGHRFD IVAPAAYDYL ACTDQVMDLM RTPPDMVYFG TLAQRSEQSR QAMEEMFQAA PPETRFFCDI NLRPGGYDRA IVDGALQQAD LLKLNDAELA VIGEMFDIQG DTETMIRRLM EARGLVLVAL TLGSRGGRLF TPDDHVRIDL PSRSAGPPVV DTVGAGDAFA AVTAAGFLQN RHLSTILEAA TEFAGRICGI QGAVPDSPDF YRQGRLPEFF YKDTGESR
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