Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_0621 |
Symbol | |
ID | 5693450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 739960 |
End bp | 740697 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641263212 |
Product | secretion protein HlyD |
Protein accession | YP_001528508 |
Protein GI | 158520638 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAACAG TTGCCATGAT CGGAAGTTTG GTGTGCCTCT GCATGTTTGC GAGCGGGCAT GGGATTGCCG GGGAGGGTGA AGCGGTGCTT CACCGGGGAC TGGTGGTACC CAGCGAGGTA GTCGAGATCA GCAGCCAGGT GCCGGGAATC ATCGAGAAGG TGCCCGTGGA ACGGGGTGAC CGTGTCAAGG CGGGGCAGGT GGTGGCCATG CTCAAGGCGG GCCTGGAAAA GGCCCAGGTT GACCTGGCCC TGGCCCGGCT GGATTTTGGC AAAAGAAAAA TGCTGCGCAA CGAGGAGCTC CACCAGAAAC AGCTGATCTC CATTCATGAA AAGGACGAGA TGGAAACCGA GGTCCGTATC ATGGAGATTC AGCTTCAGGA AGCCCAGGCA AATCTGGATC TGCGCACCAT TTACAGCCCG GTAAACGGTG TCGTGGTGGA ACGCCATCTG GGACCGGGCG AGTATATCGG TGAGGGGTCG GTCATGACCA TCGCCTGCGT GGACCCGCTC AACGTTGAGG TGGTGGTGCC GGCCGCGCTT TACGGCACCA TTCAAGAGGG GATGAAGGCC CAGGTTATGC CCGATGATCC GCCGGGCGGG TCATACCAGG GAAGGGTAGT GATCGTGGAT GGGGTGATTG ATGCGGCCAG TGGTACCTTC GGGGTCCGGG TCCGGCTATC CAACCCCGGC TACAGGCTGC CCGCCGGGGT GAACTGCCAG GTGCGGTTCT TTAACTGA
|
Protein sequence | MKTVAMIGSL VCLCMFASGH GIAGEGEAVL HRGLVVPSEV VEISSQVPGI IEKVPVERGD RVKAGQVVAM LKAGLEKAQV DLALARLDFG KRKMLRNEEL HQKQLISIHE KDEMETEVRI MEIQLQEAQA NLDLRTIYSP VNGVVVERHL GPGEYIGEGS VMTIACVDPL NVEVVVPAAL YGTIQEGMKA QVMPDDPPGG SYQGRVVIVD GVIDAASGTF GVRVRLSNPG YRLPAGVNCQ VRFFN
|
| |