Gene Dole_0621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_0621 
Symbol 
ID5693450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp739960 
End bp740697 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content60% 
IMG OID641263212 
Productsecretion protein HlyD 
Protein accessionYP_001528508 
Protein GI158520638 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0845] Membrane-fusion protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACAG TTGCCATGAT CGGAAGTTTG GTGTGCCTCT GCATGTTTGC GAGCGGGCAT 
GGGATTGCCG GGGAGGGTGA AGCGGTGCTT CACCGGGGAC TGGTGGTACC CAGCGAGGTA
GTCGAGATCA GCAGCCAGGT GCCGGGAATC ATCGAGAAGG TGCCCGTGGA ACGGGGTGAC
CGTGTCAAGG CGGGGCAGGT GGTGGCCATG CTCAAGGCGG GCCTGGAAAA GGCCCAGGTT
GACCTGGCCC TGGCCCGGCT GGATTTTGGC AAAAGAAAAA TGCTGCGCAA CGAGGAGCTC
CACCAGAAAC AGCTGATCTC CATTCATGAA AAGGACGAGA TGGAAACCGA GGTCCGTATC
ATGGAGATTC AGCTTCAGGA AGCCCAGGCA AATCTGGATC TGCGCACCAT TTACAGCCCG
GTAAACGGTG TCGTGGTGGA ACGCCATCTG GGACCGGGCG AGTATATCGG TGAGGGGTCG
GTCATGACCA TCGCCTGCGT GGACCCGCTC AACGTTGAGG TGGTGGTGCC GGCCGCGCTT
TACGGCACCA TTCAAGAGGG GATGAAGGCC CAGGTTATGC CCGATGATCC GCCGGGCGGG
TCATACCAGG GAAGGGTAGT GATCGTGGAT GGGGTGATTG ATGCGGCCAG TGGTACCTTC
GGGGTCCGGG TCCGGCTATC CAACCCCGGC TACAGGCTGC CCGCCGGGGT GAACTGCCAG
GTGCGGTTCT TTAACTGA
 
Protein sequence
MKTVAMIGSL VCLCMFASGH GIAGEGEAVL HRGLVVPSEV VEISSQVPGI IEKVPVERGD 
RVKAGQVVAM LKAGLEKAQV DLALARLDFG KRKMLRNEEL HQKQLISIHE KDEMETEVRI
MEIQLQEAQA NLDLRTIYSP VNGVVVERHL GPGEYIGEGS VMTIACVDPL NVEVVVPAAL
YGTIQEGMKA QVMPDDPPGG SYQGRVVIVD GVIDAASGTF GVRVRLSNPG YRLPAGVNCQ
VRFFN