| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0608 |
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| Symbol | |
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| ID | 5693432 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 677324 |
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| End bp | 678886 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641263194 |
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| Product | RNA binding metal dependent phosphohydrolase |
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| Protein accession | YP_001528495 |
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| Protein GI | 158520625 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1418] Predicted HD superfamily hydrolase |
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| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG
[TIGR03319] conserved hypothetical protein YmdA/YtgF |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000412066 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATAT ACACAGGTGT TGCCGGTGTT GCCGGTGTTG TGATCGGGTA TGTGCTGGCG
GTTGTGATAC AGAACTGGCT GGCCAGAAAG AAAGTGAATG AAGCCCGGGA GGAGAGCCGG
CGGATTGTCG AGGATGCCCG GTTGCGGGCG GAAAACCTTG TCAAGGAAGC CAAGCTGGAG
GCCAAAGACC GGCTCTTCAA GATGAAGAGC GATTTTGACG CCGAAACCGC GGATGCCAGA
AAGGAATTAA AAAAGCTTGA GCAGCGGCTG ATCTCCAAAG AGGAGAACCT GGACAAGAAG
TATGACCAGA TGGAGCGGCG GGAGCAGGAG GTCGTCAAGA AGGAGAAGCG GGCCCAGAAG
ATCGAAGAGG AGGTCGAGCA GAAACAGGCT GAATACGATC ACCTGCTGGC TGAACAGAAA
CGGCAGCTGG AGGTGGTGTC CGGACTGACG GCGGAACAGG CCAAGGAGAT TCTGGTCCGC
TCCATGGAGG ATGAGGCCCG GCACGATGCC GCCAAGCTGA TCAAGAAAAT TACCACCGAG
GCCGAGGAAG AGGCGGTCAA GAAGGCCCAG AAGATCATTT CCACGGCCAT TCACCGGTAC
GCCGGCGACT ATGTGGCGGA AAAGACCGTA TCGGTTGTGG AACTGCCCGG CGACGAGATG
AAGGGCCGCA TCATCGGCAG GGAGGGCCGG AACATTCGGG CGCTGGAAGC GGCCACCGGC
ATCGACCTGA TTATTGATGA CACACCGGAG GCCGTGATTC TGTCCGGCTT CAACCCGGTG
CGGCGTGAGG TGGCCCGTAT TTCGATCCAG CGGCTGATTG CCGACGGCCG TATTCATCCG
GCCCGCATTG AGGATGTGGT AAAAAAGGTC GAAGTCGAGG TGGCGGCAAC GATAAAGGAG
GCCGGCGAAC AGGCGGCCTT CGACCTGGGG GTGCACGGTA TCAACCCCGA GCTGGTGCGC
ATCCTGGGGA GCCTGAAGTT TCGTACCAGC TATACACAGA ACGTGCTGCA GCATTCAATC
GAGGTGGGCT TTCTGTGCGG CATTATGGCC GCTGAGCTGG GCCTGGACCA GAAGCTTGCC
CGGCGCATGG GCCTGCTGCA CGATATCGGC AAGGCCATCG ACCATGAGGT GGAAGGCCCG
CATGCCCTGA TCGGCTCCAA CGTGGCCCTG AAATACGGAG AGTCGGCGGA GGTGGCCCAT
GCCATCGGAG CTCATCACGA GGATGTGGAG CCTCAGTCGG TCTATGATGT CCTGGTGCAG
GCATCGGACG CTCTTTCCGG TGCCCGGCCC GGTGCCCGCA AAGAGCTGCT GGAAAACTAC
ATCAAGCGGC TGGAAGACCT GGAGAAGATC GCCAACGCGT TCAAGGGCGT TGCCACGGCC
TACGCCATTC AGGCCGGCCG TGAGCTGCGG GTGATGGTGG AAGGCGAGGC CCTGTCGGAC
GAAGAGTCGG TGGTGCTGAG CCGCAACATT GCCAAGCAGA TCGAGGAGAA CCTCACCTTT
CCGGGCCAGA TCAAGGTGAC AGTGATCCGG GAAACAAGAG CCGTCGAATA CGCTAATAAA
TAA
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| Protein sequence | MNIYTGVAGV AGVVIGYVLA VVIQNWLARK KVNEAREESR RIVEDARLRA ENLVKEAKLE
AKDRLFKMKS DFDAETADAR KELKKLEQRL ISKEENLDKK YDQMERREQE VVKKEKRAQK
IEEEVEQKQA EYDHLLAEQK RQLEVVSGLT AEQAKEILVR SMEDEARHDA AKLIKKITTE
AEEEAVKKAQ KIISTAIHRY AGDYVAEKTV SVVELPGDEM KGRIIGREGR NIRALEAATG
IDLIIDDTPE AVILSGFNPV RREVARISIQ RLIADGRIHP ARIEDVVKKV EVEVAATIKE
AGEQAAFDLG VHGINPELVR ILGSLKFRTS YTQNVLQHSI EVGFLCGIMA AELGLDQKLA
RRMGLLHDIG KAIDHEVEGP HALIGSNVAL KYGESAEVAH AIGAHHEDVE PQSVYDVLVQ
ASDALSGARP GARKELLENY IKRLEDLEKI ANAFKGVATA YAIQAGRELR VMVEGEALSD
EESVVLSRNI AKQIEENLTF PGQIKVTVIR ETRAVEYANK
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