Gene Dole_0604 details

Gene Information

• Locus tag: Dole_0604
• ID: 5693428
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfococcus oleovorans Hxd3
• Kingdom: Bacteria
• Replicon accession: NC_009943
• Strand: +
• Start bp: 674928
• End bp: 675329
• Gene Length: 402 bp
• Protein Length: 133 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 641263190
• Product: ATP synthase F1, epsilon subunit
• Protein accession: YP_001528491
• Protein GI: 158520621
• COG category: [C] Energy production and conversion
• COG ID: [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)
• TIGRFAM ID: [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria)

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.000108005
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTGAAA ATTTGAGGCT TGAAGTGGTT ACCCCGGAAA AAACGGTGGT CAGCGACGAC 
GCGCAGATCG TCATGGCACC GGGCGTTCTG GGTGAATTTG GTGTACTTGT CAATCACACC 
CCTTTTTTAA CGTCCCTGAT GCCGGGAGCC CTTCACTATA AAGATACAGG TGAAAAAGAG 
CACCTGCTGT TTGTCAGCGA CGGCTTTGCC GAGGTGCTGC CCGACCGGAT CACCGTTCTG 
GTGGAATCCG CCGAAAGAAA AGAGGATATC GACCTTCAGC GGGCCGAGGC CGCCAGAGAG 
CGGGCGGAAA AGCGGCTGGA GAGCGGGGAA GACGTTGATT TTGTCCGGGC AAAGGCTGCT 
TTGACACGGG CGATACAGCG GATTCGCGTA GCCGGCGCCT GA 

 

Protein sequence

MAENLRLEVV TPEKTVVSDD AQIVMAPGVL GEFGVLVNHT PFLTSLMPGA LHYKDTGEKE 
HLLFVSDGFA EVLPDRITVL VESAERKEDI DLQRAEAARE RAEKRLESGE DVDFVRAKAA 
LTRAIQRIRV AGA