Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_0579 |
Symbol | |
ID | 5693403 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 648076 |
End bp | 648825 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641263165 |
Product | beta-lactamase domain-containing protein |
Protein accession | YP_001528466 |
Protein GI | 158520596 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000409851 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCACAT ACACCATCCA TCCCATCGTG ATGGGGACCA AGGTGTTTGA CAAGAGCATG ATGACCTACC AGTTCGGCGC CGGCACCCCG TATACCATTC CTATCTACTG CTGGTATATC AAGGGCGGCG ACAAGACCAT CCTGGTGGAC ACCGGGGAAC GGAATCCCAT CTGCTCGGCG GAACGGGAAG CGGCCATCGG CGGAAAGATC TATACCTTTG AGGAGGGCCT GGCCCGGTGG GGTATAAAAC CGGAAGCCAT CGACGTTGTG ATTCACACCC ACCTTCACAA TGACCATTGT GAAAACGATG ACAAGTGTCC CAACGCGGTG TTTTACGTGC ACGAAAGGGA ACTGGCCCAT CTTCATGCCC CCCATCCCCT GGATATCCGG TATGTGGAAG ATTACCTGGA AACCGTTGAA GAAAACGGCC AGGTGGTCAC GGTGGAGGGC AACACCGATA TTGTGGATGG CATTCGCGTG ATTCACACGC CGGTGCACAC CGAGGGCGGG CTCACGGTGC TGATTCAGAC CCCTGCCGGC ACCGCGGCCA TTACAGGGTT CTGCGTGATC GACGAAAATT TTAATCCCCC TAAAGAGGCA CGGGCCATGG AGATGGAGGT GATTCCGCCG GGCACCGTGG TCAACAGCTA CAAGGCCTAT GACATCATGC AGGCGGTCCG GTCCATGGCG GATATCCTGC TGCCGCTGCA TGAGCCCCGG TTCGCGGCCA TGGGCACCAT ACCTGAATAA
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Protein sequence | MTTYTIHPIV MGTKVFDKSM MTYQFGAGTP YTIPIYCWYI KGGDKTILVD TGERNPICSA EREAAIGGKI YTFEEGLARW GIKPEAIDVV IHTHLHNDHC ENDDKCPNAV FYVHERELAH LHAPHPLDIR YVEDYLETVE ENGQVVTVEG NTDIVDGIRV IHTPVHTEGG LTVLIQTPAG TAAITGFCVI DENFNPPKEA RAMEMEVIPP GTVVNSYKAY DIMQAVRSMA DILLPLHEPR FAAMGTIPE
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