Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_0551 |
Symbol | |
ID | 5693375 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 616751 |
End bp | 618085 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641263137 |
Product | ammonium transporter |
Protein accession | YP_001528438 |
Protein GI | 158520568 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0004] Ammonia permease |
TIGRFAM ID | [TIGR00836] ammonium transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.138976 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACGGA TATTATATAT GACGCCCCTG CTGGGTCTGG CCATGTCAGT CAGTGCATGG GCCGGGGAAG CGGCCATCAC GCCGGCGGCC AACGCCGCTG CCATTGAACT GGTGCAGAGC CATGCCGACT ACCTCTGGAC CCTGGTTGCG GCGTGCCTGG TCTTTTTCAT GCAGGCCGGG TTTGCCCTGG TGGAGACCGG CTTTACCCGG GCCAAGAACG CGGTCAATAT TTTAATGAAA AACCTGATGG ACTTTTCCAT CGGCAGCCTG GTCTTCTGGG CCGTGGGATT CGGCCTGATG TTCGGGGCCT CGGCCTCCGG ATGGTTCGGC ACCAGCGGGT TCTTCTTAAG TGACTTTTCC CCGGAAGGGG ATCCCTGGGT CCTGGCCTTC TGGATGTTCC AGGTGGTCTT CTGCGCCACG GCAGCCACCA TCGTGTCCGG TGCCATGGCG GAACGGACAA AGTTCATCGG CTATATCGCC TACAGTATCG TGTTAAGCGC CCTGATCTAC CCGGTGTTCG GCAGCTGGGC CTGGGGCAGC CTGTTCAACG GCGGCGGCTG GCTGGAAGGG TTCGGGTTTA TCGACTTTGC CGGGTCCACG GTGGTGCACT CGGTGGGCGG CTGGGCGGCC CTGGCAGGTG CCATCGTGCT GGGCCCCCGT ATGGGAAAGT ACGCAAAGGA CGGCACGGCA CGGGCCATTC CCGGTCACAA CATTCCCCTG GCGGCCCTGG GCGTCTTTAT CCTGTGGCTG GGCTGGTTCG GGTTCAACCC CGGCTCCACC ACCGTTGCGG ACAAAAGCAT TGCCATGATC TTTGTCAACA CCAACCTGGC CGCGGCCACA GGCGCCGTGT TTGCCATGAT CGTCTCCTGG CTCAAGTTCG GCAAGCCGGA AATCAGCATG AGCTTAAACG GCGCCCTGGC CGGCCTGGTG GGTATCACGG CCGGATGCGC CAACGTGTCG CCGACCAGTT CCATTATCAT CGGCGCCATT GCCGGTGTGC TGGTGGTGTT CTCCGTTCTC TTTTTCGACA AAATCAAGGT CGACGACCCG GTGGGCGCGG TATCGGTCCA CGGTGTGTGC GGGGCCTGGG GAACGCTGGC CGCCGGTATC TTCAACATGG GCGGCACATC GGCGTCCATC ATCGGCGTGC AGCTTCTGGG CATGGGGACC TGCTTTGCAT GGACCTTTTC CATGGCCTTT GTCATGTTCA AGCTGATAGA CAAAACCATC GGCCTGCGGG TATCTCCTGA AGAAGAGGCC GAGGGGCTTG ACTTTTCCGA GCACGGCGGT AATGCCTACC CGGATTTTAG TGTGTCGGCC TACGCCCAGA AGTAG
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Protein sequence | MKRILYMTPL LGLAMSVSAW AGEAAITPAA NAAAIELVQS HADYLWTLVA ACLVFFMQAG FALVETGFTR AKNAVNILMK NLMDFSIGSL VFWAVGFGLM FGASASGWFG TSGFFLSDFS PEGDPWVLAF WMFQVVFCAT AATIVSGAMA ERTKFIGYIA YSIVLSALIY PVFGSWAWGS LFNGGGWLEG FGFIDFAGST VVHSVGGWAA LAGAIVLGPR MGKYAKDGTA RAIPGHNIPL AALGVFILWL GWFGFNPGST TVADKSIAMI FVNTNLAAAT GAVFAMIVSW LKFGKPEISM SLNGALAGLV GITAGCANVS PTSSIIIGAI AGVLVVFSVL FFDKIKVDDP VGAVSVHGVC GAWGTLAAGI FNMGGTSASI IGVQLLGMGT CFAWTFSMAF VMFKLIDKTI GLRVSPEEEA EGLDFSEHGG NAYPDFSVSA YAQK
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