Gene Dole_0542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_0542 
Symbol 
ID5693364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp607665 
End bp609377 
Gene Length1713 bp 
Protein Length570 aa 
Translation table11 
GC content61% 
IMG OID641263126 
ProductDNA polymerase III, subunits gamma and tau 
Protein accessionYP_001528429 
Protein GI158520559 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID[TIGR02397] DNA polymerase III, subunit gamma and tau 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000531282 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCTATC TTGTTCTTGC CCGCAAATAC CGGCCCCAGA CCTTTGAGGA GGTTGTCGAG 
CAGCAGCAGG TGACCCGCAC CCTGACCAAT GCCATTGCGT CGGGACGGGT GGCCCACGCC
ATTCTGTTCA CCGGTCCCCG GGGCACCGGG AAAACCACCA TCGCCCGGAT TCTGGCCAAG
GCAATGAACT GCGAAAAGGG CCCCACGCCC ACGCCCTGCT GCGCCTGCCG CTCCTGCCTG
GAGATCGCGT CGGGAAACGC CACCGATGTA TTTGAAATCG ATGGCGCCTC CAACAACAGC
GTGGACCAGG TACGGGAGCT TCGCGGCAAC GTCAAGTTCA TGCCGGCCCA CAGCCCCTAC
AAAATCTATA TCATCGACGA AGTCCATATG CTCTCCGGCC CGGCCTTCAA CGCCCTGCTC
AAGACCCTGG AAGAACCGCC CGCGCATGTC ATGTTCTTTT TTGCCACCAC CGAGCCCCAC
AAAATTCCGG TTACCATTCT CTCCCGGTGT CAGCGCCACG ACCTCTCCTT TGTGGGCATT
GATCCCCTGG TGGCGCACCT GGAAACCCTG TGCGAAAAAG AAAACATCCC CATCGAAAAA
AAGAGCCTTG AACTGATCGC CCACGAGGCG GGCGGCAGCG TCCGGGACAG CCTGAGCCTG
CTGGACCAGG TGATGAGCAG CGCCCAGGGA CCGGTTTCCC ATGAAATGGT GCTCGAAGCC
CTGGGCATCA TCGACCGGGA GGTGATTTTC GGCCTGTCCG GGGCCGTGCT GGCCGGCGAC
ATGACAGGTG CGCTGGACAT TCTGGATACC GTTTACAGGG GCGGGCACGA CATCAAGCGA
TTCTACGCCG AGATGCTGGG CCATTTTCGA GACCTGCTGA TGGTCAAGCT GGGGGTCCGG
GCCGAGCGCC TGGCGTCCCT GCCCGGCTGG GCCGTGGAAA AGATGCAGGC CCAGACCCGC
GACGTGACCG AACTCTTTTT AAGCCAGGCC ATGGCCCTGA TGCTGGCGGA AGAGGACAGG
GTCCGGTTTT CCAGCCAGCC GAAAATCGCC GTGGAGATGG TCTTTGTCAA GCTGCTGCAC
ACCAAACCGG TGCTGCCCAT TGATACGCTG ATTCAAAAAG TGGACGCCCT CAGAAAATCC
TTTGCCCAAC TGGCCGGCAA CGGCAATGCA CCTGCCACGG CTTCCAAAGA CGCGGCACCC
GAAAGAAACG CCGACGGTGC TGCCGGTGTT TCCGCGTCCC GGCCGGCCCA GGCCAGGCCC
GCGCCCACGG AAAATCAACC GCGGCCATCT TCTCCGCCGC CGGCTTCGCC ACTGCCAGAA
GAAACCGGGC CGGTCGCAAC CGGTACCACG GACCCGGTAC CCCTGGACAA CGCAGGGACC
TGGGAGGCCA TTCTGGCCAG AATCGACGAA CAATACCCCC TGCTGGGGGC CAACCTGCGC
AACAGCACCC TGGCCGCCAT GGAGGGCGGC CGGCTGGAGA TCAAGGTATA CGGTTCCCAG
ACCAACAAGG CCATCCTTGC CCGGGAACAG AGCATGGAAA ACCTGAAACA GGTGTGTTGT
GATTTTTTTA AAACCGATAT AAACCTTGCC GTCACCTATA CGTGCGACAC CCAGCCGGCG
CAACCGGACA AACAAAAACC CAGGACCGCG GGTCCGGACC CGCTGGTTGC CGAGGCCCTG
AACATTTTTG GTGGAACTAT TGTAAACACA TAG
 
Protein sequence
MSYLVLARKY RPQTFEEVVE QQQVTRTLTN AIASGRVAHA ILFTGPRGTG KTTIARILAK 
AMNCEKGPTP TPCCACRSCL EIASGNATDV FEIDGASNNS VDQVRELRGN VKFMPAHSPY
KIYIIDEVHM LSGPAFNALL KTLEEPPAHV MFFFATTEPH KIPVTILSRC QRHDLSFVGI
DPLVAHLETL CEKENIPIEK KSLELIAHEA GGSVRDSLSL LDQVMSSAQG PVSHEMVLEA
LGIIDREVIF GLSGAVLAGD MTGALDILDT VYRGGHDIKR FYAEMLGHFR DLLMVKLGVR
AERLASLPGW AVEKMQAQTR DVTELFLSQA MALMLAEEDR VRFSSQPKIA VEMVFVKLLH
TKPVLPIDTL IQKVDALRKS FAQLAGNGNA PATASKDAAP ERNADGAAGV SASRPAQARP
APTENQPRPS SPPPASPLPE ETGPVATGTT DPVPLDNAGT WEAILARIDE QYPLLGANLR
NSTLAAMEGG RLEIKVYGSQ TNKAILAREQ SMENLKQVCC DFFKTDINLA VTYTCDTQPA
QPDKQKPRTA GPDPLVAEAL NIFGGTIVNT