Gene Dole_0540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_0540 
Symbol 
ID5693362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp606702 
End bp607301 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content60% 
IMG OID641263124 
Productrecombination protein RecR 
Protein accessionYP_001528427 
Protein GI158520557 
COG category[L] Replication, recombination and repair 
COG ID[COG0353] Recombinational DNA repair protein (RecF pathway) 
TIGRFAM ID[TIGR00615] recombination protein RecR 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000530295 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTTCCCT ATCCGCCCTC CATTCGCAAC GCGATTTCCC ACCTTTCCCG GCTTCCCGGC 
ATCGGCCAGA AAACCGCGGA GCGGCTGGCC ATGCACCTGC TTCACGTGCC GGACCGGGCC
GTGCACGAAC TGGCCCGCAG CCTGGTGGAC CTGAAAAAAA ACACCCGAAT GTGCTCGGTC
TGTTTTACCT TAAGCGACAC CCCGGTGTGC GCCATCTGCG GCGATCCCGA CCGCAACGCC
TCACTGCTCT GCGTGGTGGA AGGCCCCACC GAGGTGATGG CCATTGAAAA AACGGCGGCC
TTCAAGGGCG TGTACCATGT GCTTCACGGT GTACTTTCTC CCATGGACGG CATCGGCCCT
GATGATATTC GCATTCGGGA GCTGGTGGAC CGGGTAAAAA AAGGAATTGT CAAAGAGATC
GTGCTCGCCA CCGATACCCG GGTGGAGGGA GAGGCCACGG CCGCCTACCT GGTTGAGGTG
TTAAAACCCT TTCCTGTTAC CGTGACCCGC ATCGCCTCGG GCATGCCCGC CGGCGGAGAA
GTCCGGTACA GCGACCCGGT GACCCTTAAA AACGCCATGG AAAAACGCTA TGCCCTCTGA
 
Protein sequence
MLPYPPSIRN AISHLSRLPG IGQKTAERLA MHLLHVPDRA VHELARSLVD LKKNTRMCSV 
CFTLSDTPVC AICGDPDRNA SLLCVVEGPT EVMAIEKTAA FKGVYHVLHG VLSPMDGIGP
DDIRIRELVD RVKKGIVKEI VLATDTRVEG EATAAYLVEV LKPFPVTVTR IASGMPAGGE
VRYSDPVTLK NAMEKRYAL