Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_0540 |
Symbol | |
ID | 5693362 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 606702 |
End bp | 607301 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641263124 |
Product | recombination protein RecR |
Protein accession | YP_001528427 |
Protein GI | 158520557 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0353] Recombinational DNA repair protein (RecF pathway) |
TIGRFAM ID | [TIGR00615] recombination protein RecR |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000000530295 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTTCCCT ATCCGCCCTC CATTCGCAAC GCGATTTCCC ACCTTTCCCG GCTTCCCGGC ATCGGCCAGA AAACCGCGGA GCGGCTGGCC ATGCACCTGC TTCACGTGCC GGACCGGGCC GTGCACGAAC TGGCCCGCAG CCTGGTGGAC CTGAAAAAAA ACACCCGAAT GTGCTCGGTC TGTTTTACCT TAAGCGACAC CCCGGTGTGC GCCATCTGCG GCGATCCCGA CCGCAACGCC TCACTGCTCT GCGTGGTGGA AGGCCCCACC GAGGTGATGG CCATTGAAAA AACGGCGGCC TTCAAGGGCG TGTACCATGT GCTTCACGGT GTACTTTCTC CCATGGACGG CATCGGCCCT GATGATATTC GCATTCGGGA GCTGGTGGAC CGGGTAAAAA AAGGAATTGT CAAAGAGATC GTGCTCGCCA CCGATACCCG GGTGGAGGGA GAGGCCACGG CCGCCTACCT GGTTGAGGTG TTAAAACCCT TTCCTGTTAC CGTGACCCGC ATCGCCTCGG GCATGCCCGC CGGCGGAGAA GTCCGGTACA GCGACCCGGT GACCCTTAAA AACGCCATGG AAAAACGCTA TGCCCTCTGA
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Protein sequence | MLPYPPSIRN AISHLSRLPG IGQKTAERLA MHLLHVPDRA VHELARSLVD LKKNTRMCSV CFTLSDTPVC AICGDPDRNA SLLCVVEGPT EVMAIEKTAA FKGVYHVLHG VLSPMDGIGP DDIRIRELVD RVKKGIVKEI VLATDTRVEG EATAAYLVEV LKPFPVTVTR IASGMPAGGE VRYSDPVTLK NAMEKRYAL
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