Gene Dole_0514 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_0514 
SymbolpyrB 
ID5693336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp578968 
End bp579903 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content61% 
IMG OID641263098 
Productaspartate carbamoyltransferase catalytic subunit 
Protein accessionYP_001528401 
Protein GI158520531 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0540] Aspartate carbamoyltransferase, catalytic chain 
TIGRFAM ID[TIGR00658] ornithine carbamoyltransferase
[TIGR00670] aspartate carbamoyltransferase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.457435 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGCTTT CAACACGCGA TATTCTGGAC ATGGGGTCGC TGAGTCGCAA GGACATTTCC 
CTGGTTCTGG ACACGGCCCG GAGCATGAAG GAGATATCCC TGCGGCCGGT AAAAAAGGTG
CCCACCCTTC GGGGAAAAAC CGTTGTCAGT TTTTTCTATG AGCCCAGCAC CCGCACCAAG
GTCTCTTTTG ACGTGGCGGC CAAGCGGCTT TCCGCTGATT CGATTTCCCT TTCCGTGGCC
ACCAGCAGCA TGACCAAGGG AGAGACCCTT CTGGACACGG TGAAAAACCT GGAGCGCATG
AGCCCGGACG TGGTGGTGAT CCGCCATTCG TCGGCCGGCG TTCCCCACAT GCTGGCCCGC
CACGTGTCGG TGCCGGTGAT CAACGCCGGT GACGGCATGC ACGCTCACCC CTCCCAGGCC
CTTTTGGACA TGATGACGGT GCAGGAGAAA AAGGGCCGCA TCGAGGGGCT GCGGCTGGCC
ATTATCGGCG ATATCGCCCG CAGCCGGGTG GCCCGGTCCA ACGTGGAGGG GTTTTTAAAG
ATGGGGGCCA GCGTGGTGCT GGCGGCGCCG CCCACCATGA TTCCCGTGGG AGTGGAGACC
TTTGGCGCGG ACGTGACCCA CAACGTGGAC GAGGCTATTG CCGGCGCCGA TGTGATCATG
ATGCTGCGCA TTCAAAAGGA GCGAGCCGCC GCCTTTCTCT TTTCCACGGT CCGGGAGTAT
GCCAGAACCT ACGGCCTGAC GGCCAATCGA TTGAAGAACG CCAAAAAGGA CGTTCTGATC
ATGCACCCCG GCCCGGTAAA CCGGGGCGTG GAGATCGCGC CCGAGGTGGC CGACGGCCCC
TACTCCGTGA TACTGGACCA GGTGGAAAAC GGGGTGGCGG TGCGCATGGC CCTGTTTTAT
CTTGTGATGG GAGGTCAGCG GGATGCTGGT GATTAA
 
Protein sequence
MGLSTRDILD MGSLSRKDIS LVLDTARSMK EISLRPVKKV PTLRGKTVVS FFYEPSTRTK 
VSFDVAAKRL SADSISLSVA TSSMTKGETL LDTVKNLERM SPDVVVIRHS SAGVPHMLAR
HVSVPVINAG DGMHAHPSQA LLDMMTVQEK KGRIEGLRLA IIGDIARSRV ARSNVEGFLK
MGASVVLAAP PTMIPVGVET FGADVTHNVD EAIAGADVIM MLRIQKERAA AFLFSTVREY
ARTYGLTANR LKNAKKDVLI MHPGPVNRGV EIAPEVADGP YSVILDQVEN GVAVRMALFY
LVMGGQRDAG D