Gene Dole_0510 details

Gene Information

• Locus tag: Dole_0510
• ID: 5693332
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfococcus oleovorans Hxd3
• Kingdom: Bacteria
• Replicon accession: NC_009943
• Strand: -
• Start bp: 575231
• End bp: 575755
• Gene Length: 525 bp
• Protein Length: 174 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 641263094
• Product: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase
• Protein accession: YP_001528397
• Protein GI: 158520527
• COG category: [R] General function prediction only
• COG ID: [COG1778] Low specificity phosphatase (HAD superfamily)
• TIGRFAM ID: [TIGR01662] HAD-superfamily hydrolase, subfamily IIIA; [TIGR01670] 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.0774852
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCATGACA TCGATCTTTC ACTGTTTGAG CCCATTTGCC TGCTGCTCCT GGACGTGGAC 
GGCGTGCTCA CCGACGGCAC CCTTTTTTAC ACCGAAACCG ACACGGAGAC AAAAGCCTTC 
AGCGTCAAAG ACGGCCTGGG GCTGCGCATG CTGGTCCGCA GCGGCATTGA CGTGGGCATT 
GTCACCGGCC GCTCCTCTGA TGCCCTGAAC CGACGATGCA AAGAGCTGGG CATTACCACC 
GTTTACGACA ATGTAAAAGA CAAGGCCGCG TGCCTGGAAG CAATCCTTGC CCGGTGCCGG 
GTTCAGGCCG GTCAGACGGC CTTTATGGGT GATGACCTGC CCGACATTCC CCTGATGAAA 
AGGGCGGGGC TTGCCATTGC CGTGGCCGAC GCCCATCCGG CGGTAAAAAG CACGGCCGCT 
TTTGTCACCC GTGCGCCGGG CGGCAGGGGC GCGGTCCGAG AAGTGTGTGA ACACATACTG 
CACGCCCGGG GCCTGTGGAA AACGGCCGCC GGAAAATTTC TTTAG 

 

Protein sequence

MHDIDLSLFE PICLLLLDVD GVLTDGTLFY TETDTETKAF SVKDGLGLRM LVRSGIDVGI 
VTGRSSDALN RRCKELGITT VYDNVKDKAA CLEAILARCR VQAGQTAFMG DDLPDIPLMK 
RAGLAIAVAD AHPAVKSTAA FVTRAPGGRG AVREVCEHIL HARGLWKTAA GKFL