| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0504 |
|---|
| Symbol | |
|---|
| ID | 5693326 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | - |
|---|
| Start bp | 570872 |
|---|
| End bp | 571330 |
|---|
| Gene Length | 459 bp |
|---|
| Protein Length | 152 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641263088 |
|---|
| Product | putative PTS IIA-like nitrogen-regulatory protein PtsN |
|---|
| Protein accession | YP_001528391 |
|---|
| Protein GI | 158520521 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTTC TGGATGTACT GCGTAAGGAG GCGGTTCTTG TCAACCTGGA GGCCCGGGAC
AAAAAAGGGG TCTTGGAGGA GTTGACCGTT CCGGCGGCAA AAATTTCAGG CATTGAGCAC
AGCAAGCTGG TGCGCATGCT CATGGAACGG GAGCGTCTGG GCACCACCGG CATCGGCGGT
GGCATCGGCA TTCCCCACGG CAAGCTCAAG GAGCTGGGAA CCGTGATCCT GTGCGCCGGC
CTGAGCCGCA AAGGCGTGGA CTTTGACGCA ATGGACGGCC GGCCGGTCCA CATCTTTTTT
CTGCTCTTTA CGCCGGAGGG TTCCACCGAG CTGCACCTCA TGCTGCTCTC CCGCATCTCC
AAGCTGCTGA AAAACGATAT TTTCAGGCAG CGGCTGGCCG ACGCCCAGGA CGCGGATACC
GTGCTGGAGA TCATCGAGGA GTATGACGAA GAGCCGTGA
|
|---|
| Protein sequence | MKLLDVLRKE AVLVNLEARD KKGVLEELTV PAAKISGIEH SKLVRMLMER ERLGTTGIGG
GIGIPHGKLK ELGTVILCAG LSRKGVDFDA MDGRPVHIFF LLFTPEGSTE LHLMLLSRIS
KLLKNDIFRQ RLADAQDADT VLEIIEEYDE EP
|
|---|
| |