| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0486 |
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| Symbol | |
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| ID | 5693307 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 552061 |
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| End bp | 552564 |
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| Gene Length | 504 bp |
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| Protein Length | 167 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641263069 |
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| Product | pilin assembly protein |
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| Protein accession | YP_001528373 |
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| Protein GI | 158520503 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4970] Tfp pilus assembly protein FimT |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain
[TIGR02596] Verrucomicrobium spinosum paralogous family TIGR02596 |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00295768 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAGGG AAATGAAAAA AGGGTTTACA CTGATGGAGC TGATGGTGGT GGTTGCCATT
ACCGCCGTGA TCATGGCCAT TGCCATACCC AACGTGGTGT CCTGGCGGAA CAACCAGCAG
CTTTCCAGGG CGGCCCGGCA GGTCTTTGTG GATATTCAGG CCACAAGAAT GTCGGCCGTC
AAATACAATC AGTTTGCCTT TATTCAGTTT GATACCGGCA ACGGAACATA CGTGGCCTGG
CGGGATTCGC CGGACGGTGC GGCCAGCGGT GTGCTGGACC CCGGGGATGA CAACGTTATT
CTGCGGGGCA ATATGCCGCC GGGGGTAGAG ATGTCGGCGG CGGCTTTTTC CGCTCCAAAC
GGCGATACGG CCGGCTTTTC ACCCATGGGT CTCTGCCGGT GGCCAAGTGG TGCCTTCAGG
AGCGGGAGTG TGACCGTGAC CAACGGGGTC CGGGACAGCA GGATTATCCT TAACGAGTCC
GGCAGGATAA GAACAGAATC GTGA
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| Protein sequence | MNREMKKGFT LMELMVVVAI TAVIMAIAIP NVVSWRNNQQ LSRAARQVFV DIQATRMSAV
KYNQFAFIQF DTGNGTYVAW RDSPDGAASG VLDPGDDNVI LRGNMPPGVE MSAAAFSAPN
GDTAGFSPMG LCRWPSGAFR SGSVTVTNGV RDSRIILNES GRIRTES
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