| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0480 |
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| Symbol | |
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| ID | 5693301 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 543538 |
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| End bp | 544689 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641263063 |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| Protein accession | YP_001528367 |
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| Protein GI | 158520497 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCGTT TAACCTTACT GGGATCCACC GGCTCCATCG GGGTCAACAC CCTGAAGGTG
GTGTCGCGGT TTTGCGACCG TTTTTCCGTG GAGGCCCTGT GCGCCCGGGG CAGCGTGGAT
ACCCTGGCCG AACAGGTTCA GCGGTTTTCC CCGTCCCTGG CCGTTGTGAT CGACGCGCCC
ACGGCTCAGG CGCTTAAGGA ACGGCTGCCG GCCGGGTCGC GCACCGAGGT GCTTTTTGGT
GAAGCCGGCT ACTGCCATGC CGTCTCCCTG CCGGGTGTGG ACATGGTGGT GTCGGCCATG
GTAGGGGCCG CCGGCCTGGG GCCAACGATT GCCGCCATAA AGGCGGGAAA GGCCGTGGCC
CTGGCCAACA AGGAGGTGCT GGTCATGGCC GGTGAAACCG TCATGGCCCT GGCCGCCCAA
AAGGGCGTTC CCCTGCTGCC CATCGACAGT GAGCACAGCG CCATCTTTCA GTGCCTTCAG
GGAAACGATA AAACGTTTTT ATCAAAGATT CATCTCACCG CTTCGGGCGG GCCGTTTTTA
AACAAGACCC GGCAGGAGAT AGAGACTGCC ACGCCGGAAC AGGCCCTTGC CCACCCCACC
TGGACCATGG GTAAAAAAAT CTCCATTGAT TCGGCTACGC TGATGAACAA GGGGCTGGAG
GTGATCGAGG CCCGGTTTCT GTTTGACGTG CCGGCGGATT GCATCGAGGT GGTGGTCCAT
CCCCAGAGCA TTATCCACTC CATGGTCTCC TATATTGACG GCTCCATGAT GGCCCAGCTC
TCGGTGCCGG ATATGAAAGG CGCCATTGCC TACGCCCTTT CATATCCGGA GCGGCTGGAT
TTAAACCAGC CGGCCCCGGA CCTGGCGGCC CTGGAACAGC TCACCTTTTT TTCCCCGGAC
CTGGACCGGT TTCCCTGCCT GGGGCTGGCC TTTGAGGCCT GCCGCCGGAA AAAGACCTTT
CCGGCGGTGC TCAACGCGGC CAACGAGGTG GCGGTGGATG CTTTTTTGCG CGAGGCCATC
CCTTTTGGCC GGATTCCCCG CGTCATTGAG CAGGTGCTGG CCGAGCACAC AGGGGTGACA
GACCCGTCGT TATCTGATAT TAAGGATGCG GACGCGTGGG CCAGGCAAAG GGCCGGCGCC
CTTTTACCTT AA
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| Protein sequence | MKRLTLLGST GSIGVNTLKV VSRFCDRFSV EALCARGSVD TLAEQVQRFS PSLAVVIDAP
TAQALKERLP AGSRTEVLFG EAGYCHAVSL PGVDMVVSAM VGAAGLGPTI AAIKAGKAVA
LANKEVLVMA GETVMALAAQ KGVPLLPIDS EHSAIFQCLQ GNDKTFLSKI HLTASGGPFL
NKTRQEIETA TPEQALAHPT WTMGKKISID SATLMNKGLE VIEARFLFDV PADCIEVVVH
PQSIIHSMVS YIDGSMMAQL SVPDMKGAIA YALSYPERLD LNQPAPDLAA LEQLTFFSPD
LDRFPCLGLA FEACRRKKTF PAVLNAANEV AVDAFLREAI PFGRIPRVIE QVLAEHTGVT
DPSLSDIKDA DAWARQRAGA LLP
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