Gene Dole_0475 details

Gene Information

• Locus tag: Dole_0475
• ID: 5693296
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfococcus oleovorans Hxd3
• Kingdom: Bacteria
• Replicon accession: NC_009943
• Strand: +
• Start bp: 540012
• End bp: 540608
• Gene Length: 597 bp
• Protein Length: 198 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 641263058
• Product: translation elongation factor Ts
• Protein accession: YP_001528362
• Protein GI: 158520492
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0264] Translation elongation factor Ts
• TIGRFAM ID: [TIGR00116] translation elongation factor Ts

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.00000567359
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGTACAA TCAGCGCGAG TCTGGTAAAA GAGCTTCGGG AAAAAACCGG AGCCGGTATG 
ATGGATTGCA AGGAGGCCCT TACGGCCTGT GACGGCGATA TCGAAAAGGC GGTGGATTTT 
CTGCGGCAGA AGGGCCTGGC AAAGGCGGCC AAGCGCTCCG GCCGGGAGAC CTCCGAGGGA 
ATTGTCGAGT CTTACATTCA TATGGGCGGC AAGATCGGCG TGATGGTGGA GGTGAACTGC 
GAGTCCGATT TCGTGGCAAA GACCGATGAC TTCAAGGAGT TTGCCCGCAA CGTGGCCATG 
CAGATCGCGG CCACCAACCC GGCGGGCATC GCCCCCGAGG ATGTGCCGGC CGACCTGCTT 
GAGCGCGAGC GGCAGGTCTA TCGGGCCCAG GTGCTGGAGA TGGGAAAGCC CGAGAATATG 
GTGGACAAGA TCGTGGACGG CAAGATCAAG AAGTTCTTCA AGGAATCCTG CCTGATAGAG 
CAGCAGTACG TGAAGAACCC GGACATCACC ATCGGGGACT ACTTAAACGA AACGGTGGCA 
AAAATCGGCG AAAGCATCCG TATCAAGCGG TTTGCCCGCT TTGCCCTGGG AGAATAG 

 

Protein sequence

MGTISASLVK ELREKTGAGM MDCKEALTAC DGDIEKAVDF LRQKGLAKAA KRSGRETSEG 
IVESYIHMGG KIGVMVEVNC ESDFVAKTDD FKEFARNVAM QIAATNPAGI APEDVPADLL 
ERERQVYRAQ VLEMGKPENM VDKIVDGKIK KFFKESCLIE QQYVKNPDIT IGDYLNETVA 
KIGESIRIKR FARFALGE