| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0466 |
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| Symbol | |
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| ID | 5693286 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 531264 |
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| End bp | 532022 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641263048 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_001528353 |
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| Protein GI | 158520483 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000184743 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA ATTTTCGGCT TATCATCGAA TATGACGGCG CCTGTTTTCA CGGCTGGCAG
ATTCAAAAAG ATCTGCGTAC CGTCCAGGGA GAGATCACCG GCGCGCTGGC GTCTATCACC
GGCCAGGCCG TCTCCGTGAT CGGTTCGGGC CGCACCGACG CCGGGGTCCA CGCCATGGCC
CAGGTGGCCA GCTTCATCTG CGATACCCGC CTGGAGCCCG GCACTCTTCA AAAGGCCCTC
AACGGCATTC TGGCCAAAGA CATCGTGATT CACGACTGCC GGGAGGTTTC CCTGAACTTT
CATGCCCGGT ATAGCGCAAA AAGCAAGACC TACCGTTACC GGATATTAAA CCGGAACCTG
CCGGCGGCCC TGTATCGCGG ATACGCGTGG CACATCAAAA AGCCCCTTGA TCTTGGGGCC
ATGACGGCGG CCCTGCCCCA TATTCTCGGC CGGCACGACT TTTCCTCCTT TGAAGGGACG
GGCAGCCCCA AGGCCTCATC TGTGCGGCAT GTGACGGCAG CGACGTTCAA CATGGCAGAA
GATGGGTATC TTGCCTTTGA GATCACCGCC GACGGATTTC TCAAACACAT GGTGCGCAAT
ATCGTGGGCA CTCTGGTGGA GGTGGGGCTG GGGAAAAAAA CACCGGAAGC GGTGGCCGAC
ATTCTGGCGG CAAAAGACCG GTCCCGGGCA GGGGCCACGG CGCCGGGCCA CGGCCTGTTC
CTGGTGCGCG TGAATTACGA ACCGTCGCCG GATCCGTAA
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| Protein sequence | MKKNFRLIIE YDGACFHGWQ IQKDLRTVQG EITGALASIT GQAVSVIGSG RTDAGVHAMA
QVASFICDTR LEPGTLQKAL NGILAKDIVI HDCREVSLNF HARYSAKSKT YRYRILNRNL
PAALYRGYAW HIKKPLDLGA MTAALPHILG RHDFSSFEGT GSPKASSVRH VTAATFNMAE
DGYLAFEITA DGFLKHMVRN IVGTLVEVGL GKKTPEAVAD ILAAKDRSRA GATAPGHGLF
LVRVNYEPSP DP
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