Gene Dole_0460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_0460 
Symbol 
ID5693280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand- 
Start bp527316 
End bp527984 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content58% 
IMG OID641263042 
Producthypothetical protein 
Protein accessionYP_001528347 
Protein GI158520477 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0165019 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCCAT TGAATCTCGT CTATGACCTG GCACGCGGCC CGCTGGTGTG GGTGGCGGTT 
GTCGTGTTTC TTGTCGGTGC CGTTGTCCAG GTATACCGGA TGTGGTCACT GACATCGGCT 
GCACGGCCCG TGGAAAACCT GCCCCGGTCC CTGAAGCCTG TTGAAAGAAA AAAACTGCCC 
CTGGGGGTTC GCCTGCGTCT TTCGGTGGCC GGCACCAGTC CGGTAACCGT GGTGGTCACG 
ACTGTTTTTC ACCTCTGCCT GGTGATCACG CCCCTGTTTG TCTTGGGCCA CAACATTCTG 
GTCGACAACG CATGGGGCGC CAGCCTCTTC TCTTTTCCAG AGGGCTTTTC CGACTTTCTC 
ACACTGGTGG TGGTTGCCTG CGCCGGATAT TTCCTGGTGC GCCGGATTTT TTACGAACGG 
GTCCGCCTTA TCTCCACGCC ATGGGATTAC CTGTTTCTGG CACTGGCGGC CGGGCCCTTT 
ATCACCGGCG CCCTGGCCTA CCACCAGATT TTCGACTACA AACTGATGAT CACGGCCCAC 
ATGCTGCTGG GCGAACTCAT GCTGATCGCC ATTCCCTTTA CCAAGTTCGC GCACATGCTC 
TTTTTTCCTG TTTTCCGGTT TGCCGTGGCA AGTGAGTACA GCCTCGGCAA CGGGCGACGG 
ACCTGGTAG
 
Protein sequence
MDPLNLVYDL ARGPLVWVAV VVFLVGAVVQ VYRMWSLTSA ARPVENLPRS LKPVERKKLP 
LGVRLRLSVA GTSPVTVVVT TVFHLCLVIT PLFVLGHNIL VDNAWGASLF SFPEGFSDFL 
TLVVVACAGY FLVRRIFYER VRLISTPWDY LFLALAAGPF ITGALAYHQI FDYKLMITAH 
MLLGELMLIA IPFTKFAHML FFPVFRFAVA SEYSLGNGRR TW