| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0456 |
|---|
| Symbol | |
|---|
| ID | 5693276 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | - |
|---|
| Start bp | 523994 |
|---|
| End bp | 525079 |
|---|
| Gene Length | 1086 bp |
|---|
| Protein Length | 361 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641263038 |
|---|
| Product | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein |
|---|
| Protein accession | YP_001528343 |
|---|
| Protein GI | 158520473 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2221] Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACC AGACCTACCG AACCGCGGCA TCAGCCGTTA TCGCGGCCGG AGCCATTCCC
TTTCCGGTCA ACGACACCCT GCTTGAAATT CTGAAAAACA TCATGACCCC GGAACAGGCC
GGGTTTGTTC AACTGCTCGA CCGGCCGTTA AACCGGGAAG AGATCAAGAA AAAATCGGGC
ATGGCGGACG CGGACCTGGA CCAGATGCTC AACAGCCTGA TGAAAAGCGG TGTGATTTCA
GGGACGGCCA GCCGGGGCTC GGGCCTGATG GTCTACCGGG CCATGCCGCC CATTCCCGGT
ATCTTTGAAA CCACCATGAT GCGGGGGGAG ACCGGGGAAA AGCAGAAAAC CCTGGCCCGG
CTCTTTGAAA ACCTGTTTGA AGAGCTTGCC GGCATGGTCC AGGCCAACTA CGATGCGATT
GTGCCGGCGT TTAAAGCCAT GCCGCCCATG ACCCGCATTG TCCCGGTGGA AAAGCACATT
GACAGGGCTT TTGACACGGT GATGCCCTGC GAGGACGTCA AAAAACTGGT GGACCGCTTT
GATACCATTG GTGTGGCCAC CTGCTACTGC CGCCACCAGA AGGACCTTCT CGACCGGCCG
TGCAAGGTGA CCGACGAAAG GAAAAACTGC CTTTTCTTCG GCAAGACCGC CGAGTTTTTC
ATCACCTACG GATTTGCCGA GCCCATCACT CAGGACCAGG CCAAACAGAT CCTGGAAAAG
GCCGAGGCAG ACGGCCTGGT ACACAAGGCG TTTCATGAAA AGTACGACAC CGGCAGAAAC
GAAATGGCCA TCTGCAACTG CTGCAAGTGC TGCTGTGAGA CCTTCCAGTC CTACTACCGG
GGCAGTTCGC CCACCATCAC CTACGCCGCC TATGTCGCAC GGGTGGATGC CGATACCTGC
ACCGGGTGCG AGGCCTGCGC CGACATCTGT CCCATGGAGG CCATTGAAAT GAAAGACGAC
ATCGCCCATG TCTCGGACTC CCGTTGCATC GGGTGCGGCG TGTGCGCCTA TCACTGCCCG
GCTGACGCCC TGGCCCTGGA GCGGACCGGT CAACGGGAGG TGTTTGTGCC ACCGCCCAAA
CACTAG
|
|---|
| Protein sequence | MSDQTYRTAA SAVIAAGAIP FPVNDTLLEI LKNIMTPEQA GFVQLLDRPL NREEIKKKSG
MADADLDQML NSLMKSGVIS GTASRGSGLM VYRAMPPIPG IFETTMMRGE TGEKQKTLAR
LFENLFEELA GMVQANYDAI VPAFKAMPPM TRIVPVEKHI DRAFDTVMPC EDVKKLVDRF
DTIGVATCYC RHQKDLLDRP CKVTDERKNC LFFGKTAEFF ITYGFAEPIT QDQAKQILEK
AEADGLVHKA FHEKYDTGRN EMAICNCCKC CCETFQSYYR GSSPTITYAA YVARVDADTC
TGCEACADIC PMEAIEMKDD IAHVSDSRCI GCGVCAYHCP ADALALERTG QREVFVPPPK
H
|
|---|
| |