Gene Dole_0454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_0454 
Symbol 
ID5693274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp521806 
End bp522975 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content58% 
IMG OID641263036 
Productpolysulphide reductase NrfD 
Protein accessionYP_001528341 
Protein GI158520471 
COG category[C] Energy production and conversion 
COG ID[COG5557] Polysulphide reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTGATA CAGCGTTAAA AGGAAACAGA CAATACTGGG CACTGATCGG GGTGCTGGCC 
GGTATCACCG GTGTGGGATT TCTGGTCTAC CTGCTCCAGT TCAAGTACGG CCTGGGCATC
ACCGGCATGA GCCGGGACGT GTCCTGGGGC TTTTACATCG CCCAGTTCAC CTTTCTGGTG
GGTGTGGCCG CCGGGGGCGT GATGCTGGTG CTGCCCTACT ACCTGCACAA CTACAAGGTG
TTCGGCAAGA TAACCATTCT GGGCGAGTTT CTGGCCATAT CCGCGGTGTC CATGTGCCTG
ATGTTTATCA TCGCCGACCT TGGTCAGCCC ATGCGGGCCT TTAACGTTCT GCTTTATCCC
ACGCCCAACT CCATGCTCTT CTGGGACATG ATCGTGCTCA ACGGCTACCT GTTTTTAAAC
GTGGTGGTGG GGTGGAGCGT TCTGGAAGCG GACCGCAACG GCGTGGCCCC GCCCAAATGG
GTCAAACCCC TGATCTACCT TTCGGTGCCC TGGGCCTTTG GTATTCATAC CGTCACCGCC
TACCTGTACT GCGGCCTGCC GGGCCGCCAC TTCTGGCTCA CCGCCATTCT GGCCCCCCGG
TTTCTGGCCT CGGCTTTTGC CGCCGGACCG GCCCTGATCA TCCTGCTGGC CATGGTCATG
CGCAAGTTCA CCAGGTTTGA CGCCGGCAAA GAGGCGATTC AGGGAATCGC CCGCATCGTG
ACTTACGCCC TGATCGCCAA CGTGTTTTTC TTTGCCTGCG AGGTGTTTGT GGCCTTCTAC
AGCAACATTC CCGGCCACAT GGACCATATC AAGTACCTGT TCGTGGGGCT TCACGGCCAT
GGGGTGCTGG TCCCCTGGAT GTGGACCTCC CTGGGCCTGA TGCTGCTGGC CATTGTGCTG
CTGGTGATTC CCAAAACACG GGCCAACGAG ACCTTCCTGG CCTTTTCCTG CATCATCCTG
TTTATCGGTA TCTGGATCGA CAAGGGCCTG GGCATGATCT CCGGCGGGTT TGTTCCCTCG
CCCATGCACC ATGTCACTGA GTACATTCCC ACGGTGCCCG AAATCATCAT CACCATCGGC
ATCTATGGCG CGGGCGCGCT GATTCTTGTG GTGCTTTACA AGATCGCCCT GACCGTCAAG
GCCGAAACCG GGGATGCGGC CCATCATTAA
 
Protein sequence
MLDTALKGNR QYWALIGVLA GITGVGFLVY LLQFKYGLGI TGMSRDVSWG FYIAQFTFLV 
GVAAGGVMLV LPYYLHNYKV FGKITILGEF LAISAVSMCL MFIIADLGQP MRAFNVLLYP
TPNSMLFWDM IVLNGYLFLN VVVGWSVLEA DRNGVAPPKW VKPLIYLSVP WAFGIHTVTA
YLYCGLPGRH FWLTAILAPR FLASAFAAGP ALIILLAMVM RKFTRFDAGK EAIQGIARIV
TYALIANVFF FACEVFVAFY SNIPGHMDHI KYLFVGLHGH GVLVPWMWTS LGLMLLAIVL
LVIPKTRANE TFLAFSCIIL FIGIWIDKGL GMISGGFVPS PMHHVTEYIP TVPEIIITIG
IYGAGALILV VLYKIALTVK AETGDAAHH