| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0451 |
|---|
| Symbol | |
|---|
| ID | 5693271 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | + |
|---|
| Start bp | 518923 |
|---|
| End bp | 520572 |
|---|
| Gene Length | 1650 bp |
|---|
| Protein Length | 549 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 641263033 |
|---|
| Product | 4Fe-4S ferredoxin, iron-sulfur binding |
|---|
| Protein accession | YP_001528338 |
|---|
| Protein GI | 158520468 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0247] Fe-S oxidoreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.961487 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAAACG ATATCAAACC GGAAGAGCTG TTGGAAAGAA CAGATTTCGG CGTACCGGTA
ACCGGGTGGA TGGACACTCC CGTTGAGATA CGGGAAGGTA TGTACTGCTA CGCGTCGAAC
CCGAAGAGCG TCGAATACGT GGAACTTCCC AACCCCCGGA AGTGGGACCC CCTGGAGGAA
GACTGGCACC TTCCGGACAA CTGGCAGCAG ATTCTGCACG AAGGCATCAA GCAGCGGCTG
GAGCGGTTTC GGACTTTTAA AGTTTTCATG GACATCTGTG TCCGTTGCGG GGCCTGCGCC
GACAAGTGCC ATTTCTACCT GGGCACCGGT GACCCCAAGA ACATGCCGGT GCTGCGGGCC
GAGCTGCTGC GGTCAGTGTA TCGAAACGAT TTCACCTCCG CCGGCAAGAT CATCAAAAAG
GTGTTCGGCA GAAACATCTC CGGCGCACGG GACCTGACCC TGGATGTGTT AAAGGAGTGG
TGGTACTACT TCTTCCAGTG CACAGAGTGC CGCCGCTGTT CGGTCTTCTG CCCCTACGGC
ATCGATACCG CGGAAATCAC GATCATGGGC CGGGAGCTGC TCAACCTGCT GGGCCTGAAT
ATCGACTGGA TCGCCACACC GGTGGCCAAC TGCTACCGCA CCGGCAACCA CCTGGGTATT
CAGCCCCATG CCTTCAAGGA CATGATCGAT TTTTTTGTCG ACGACATTGA GGAGTTCACC
GGCATCGCCC TGGATCCGCC CCCGATGAAC AAAAAGGGTG CCGACATCCT TTTTATCACG
CCGTCGGGCG ATGTGTTTGC CGATCCGGGC ACCTACACCG CCATGGGCTA CCTGATGCTG
TTCGACTACC TGAAAAAGGT GTACGGCCTG GATGTCACCT GGAGCACCTA CGCTTCCGAG
GGCGGCAACT TCGGGTTTTT TACCTCCCAC GAGACCATGA AGCGGCTGAA CGCGAAAATG
TATGCCGAGG CCCGGCGCCT GGGCGTCAAG TGGATTCTCG GCGGCGAGTG CGGTCACATG
TGGCGGGTGA TTCACCAGTA CATGGGAACC ATGAACGGAC CGGCCGACTT TCTGGAGGAA
CCGGTTAATC CCATCACCGG CACCGTGTTT GAAAATGCCC GGTCCACCAA GATGGTCCAC
ATCGCCGAGT TTACGGCGGA CCTGATCAAG CACGGTAAGC TGAACCTCGA CAAGTCGCGC
AACGACCACC TGAAGGTCAC CTACCACGAC TCCTGCAACC CCGCCCGGGG CATGGGGCTG
CTCGACGAAC CCCGGTATGT CATTCAGAAT GTGTGTAACC ATTTTCACGA GATGCCGGCC
AACACCATTC GGGAGCAGAC CTTCTGCTGC GGCAGCGGCG CCGGTCTGAA CGCCGGTGAG
AATATGGAGC TGCGCATGTC GGGCGGTCTG CCCAGGGCCA ACGCGGTCAA GTATGTACAC
GAGACCTTTG GTGTCAATAT GCTGTCCTGT ATCTGCGCCA TCGACCGGGC GGTGTTTCCC
GCGCTGATGG AGTACTGGGT GCCTGAAGTG GGCGTCACCG GGCTGCACGA ACTGGTGGCC
AATGCCCTGG TCTTTCCTGG AGAGCCCAGA CGAACCATGG ATTTACGCGG AGAACCGCTT
TTAGGCATGG AGGATGCTGA TGAAGAATAA
|
|---|
| Protein sequence | MGNDIKPEEL LERTDFGVPV TGWMDTPVEI REGMYCYASN PKSVEYVELP NPRKWDPLEE
DWHLPDNWQQ ILHEGIKQRL ERFRTFKVFM DICVRCGACA DKCHFYLGTG DPKNMPVLRA
ELLRSVYRND FTSAGKIIKK VFGRNISGAR DLTLDVLKEW WYYFFQCTEC RRCSVFCPYG
IDTAEITIMG RELLNLLGLN IDWIATPVAN CYRTGNHLGI QPHAFKDMID FFVDDIEEFT
GIALDPPPMN KKGADILFIT PSGDVFADPG TYTAMGYLML FDYLKKVYGL DVTWSTYASE
GGNFGFFTSH ETMKRLNAKM YAEARRLGVK WILGGECGHM WRVIHQYMGT MNGPADFLEE
PVNPITGTVF ENARSTKMVH IAEFTADLIK HGKLNLDKSR NDHLKVTYHD SCNPARGMGL
LDEPRYVIQN VCNHFHEMPA NTIREQTFCC GSGAGLNAGE NMELRMSGGL PRANAVKYVH
ETFGVNMLSC ICAIDRAVFP ALMEYWVPEV GVTGLHELVA NALVFPGEPR RTMDLRGEPL
LGMEDADEE
|
|---|
| |