Gene Dole_0443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_0443 
Symbol 
ID5693263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp511235 
End bp511591 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content42% 
IMG OID641263025 
ProductHicB family protein 
Protein accessionYP_001528330 
Protein GI158520460 
COG category[S] Function unknown 
COG ID[COG4226] Uncharacterized protein encoded in hypervariable junctions of pilus gene clusters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.134011 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGATA GAGACCGTTA TTTAAAAATT GTCGAGTGGT CAGATGAAGA TAAATGCTAT 
GTCGGTTCCG TGCCAGGATG GATCGGGAAG TGTTGCCACG GAGACAACGA AGAAAAAGTG
TATCGTCAAC TCTGCCGTAT CGTTGATGAA TGGATTGACA TATATAAAAA AGACGGCCAG
CCTTTGCCTC CATCTATAAG TGATAAACAG TATTCCGGCA AGTTTCAATT GCGTACGGGG
TGTGAGCTTC ACAAGGCTTT AGCAATAAAA GCCCTACAGA CCGGTAACAG CCTTAATAAT
TATTGTATTA ATGTTTTGCG AAAAGAAGTA GCGCCGTCTG AAAAAACCAT GGACTGA
 
Protein sequence
MKDRDRYLKI VEWSDEDKCY VGSVPGWIGK CCHGDNEEKV YRQLCRIVDE WIDIYKKDGQ 
PLPPSISDKQ YSGKFQLRTG CELHKALAIK ALQTGNSLNN YCINVLRKEV APSEKTMD