| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0426 |
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| Symbol | |
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| ID | 5693245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 490723 |
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| End bp | 492519 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641263007 |
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| Product | signal transduction histidine kinase, nitrogen specific, NtrB |
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| Protein accession | YP_001528313 |
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| Protein GI | 158520443 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.830485 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTCCAA ATACACGTCG CCGCAACCGG ACAAACCTGC ACACATCTCC ATGGATTATC
ATCGGATCGG TGGGAATCCT GCTGATCGTC GTGGTGGTCC TGGCATATCA GAACTACAGT
CGCGAAAAAA AATATATGTC CCAAATTTTG AGTGAAAAGG GCGCCGCGAT CATCAAGGCG
GTGGAAGCCG GCGCCCGTAC GGGAATGATG GGGATGATGT GGGGCGGACA GCAGGTCCAG
TCATTAATCG AGGAAACCGC CCAACTGTCG GATGTCTTCT ATATTACCGT GGTAAATCGC
AAAGGGTTGG TTTTGGCCAG CAGCAATCGC GGATTGATCG GCACCCAAAT GAACAGCGGT
TTTCCCGAAA AAGGACTTGA TCAACCAGAG GAAATCAACT GGCGGTATAA GCGCATCGAT
GATCAGCGGA ACACTTTTGA AGTGTACCGA CTTTTTATGC CGATCACTGA CCAGGAGCGT
CAGATGGGTG ATCGTATGTG CCAAATGAAG CAAGGGCGCA AGATGATGAT GCGGTCCGAT
AACGACTGGT GTTTTCCTAC CTCAAGCGGC GACAGCGATC AGATCATACT GGTTGGCTTG
AACCCTCAGC CCTTTGAAGA AGGGCGCAAG GAGGACATCC GCAACACGGC CATCATATCA
GGCATTTTGA TTTTACTGGG GCTGGCCGGT TTTATTTCGA TGTTCTGGAT GCAGGGATAC
CGCTCGGCTA AAAAATCACT TCAGGACACC AGCGCCATTA AGGACCAGGT GGTCACCAGC
CTCCCCGTGG GTTTGATCGC CACGGATAAA CACGGAAAGA TCGCATTTTA CAACAGTGCC
GCAGAACGGA TCACCGGGCT TGACTTGGCC CAGGCGCGGG GGAAGGAACC CGACACTGTC
CTACCAAGGC ATTTATGTGG GCTGAAGGAA TCACTGGATC TTGGAGAGTC GATATTCGAA
AAAGAAATGG AATGTGAGTT CACCGAAAAC AAGATTGTCC CGGTGAGCAT CAGCGCCTCG
AAAATTATCA ACGAAGAAGG TCAGTTTGTC GGGCAGGTTC TGATCATCCG AGATCTTGGG
GAGGTTCGCC GCCTTCAGGA TGAAATCCGC CGCAAGGAAA AGCTGGCGGC GATCGGGGAG
TTGGCGGCCG GCGTGGCCCA TGAAATTAGA AACCCGCTGA GTTCCATCAA AGGCATCGCT
TCCTACTACA AGAGCAAGTT CGAGGACGGC AGCGAGGACA AAGAGATGGC CGGGGTCATG
ATCGAGGAGG TGGATCGCCT CAGCCGAGTC ATCAGCGAGC TGCTGGAGTT CGCCAGGCCG
ACGAAATTAA ACAGGAAGCT ATCCGATATG AATGAACTGC TGAAACATTC AACCCGGCTG
GTCGAGCAGG AAGCAGCGGC GAAAAAAGTC GATATTCAAC TCAATCTTAC ATCCGAATCC
ATTGAGGCCG ATGTCGATCC GGATCGTTTG ACCCAGTGCT TTTTGAATCT GTTTCTGAAT
GCCTTGCAAG CCATGGAAAG TGGCGGCCGG TTGACTGTTT CCAGCTCCAC AGGCGCAAAC
GGGAACGTTG CAATTGACAT CAAGGATAAC GGCTCGGGGA TATCCGCAGA AGATCTCAGC
AAGATATTCG ACCCCTATTT TACCACCAAA CCAAAAGGCA CCGGCTTGGG CTTGGCGATT
GTGCACAAGA TTATCGAAGC CCACCAGGGG CAAATCAAAG TTCGAAGCAC CATTGGTCAG
GGCACCGTGT TCTCGATTGC CCTGCCGCTT GGGGACAGCG AAATGAGGTT GTCATGA
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| Protein sequence | MIPNTRRRNR TNLHTSPWII IGSVGILLIV VVVLAYQNYS REKKYMSQIL SEKGAAIIKA
VEAGARTGMM GMMWGGQQVQ SLIEETAQLS DVFYITVVNR KGLVLASSNR GLIGTQMNSG
FPEKGLDQPE EINWRYKRID DQRNTFEVYR LFMPITDQER QMGDRMCQMK QGRKMMMRSD
NDWCFPTSSG DSDQIILVGL NPQPFEEGRK EDIRNTAIIS GILILLGLAG FISMFWMQGY
RSAKKSLQDT SAIKDQVVTS LPVGLIATDK HGKIAFYNSA AERITGLDLA QARGKEPDTV
LPRHLCGLKE SLDLGESIFE KEMECEFTEN KIVPVSISAS KIINEEGQFV GQVLIIRDLG
EVRRLQDEIR RKEKLAAIGE LAAGVAHEIR NPLSSIKGIA SYYKSKFEDG SEDKEMAGVM
IEEVDRLSRV ISELLEFARP TKLNRKLSDM NELLKHSTRL VEQEAAAKKV DIQLNLTSES
IEADVDPDRL TQCFLNLFLN ALQAMESGGR LTVSSSTGAN GNVAIDIKDN GSGISAEDLS
KIFDPYFTTK PKGTGLGLAI VHKIIEAHQG QIKVRSTIGQ GTVFSIALPL GDSEMRLS
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