Gene Dole_0415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_0415 
Symbol 
ID5693234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp477923 
End bp479095 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content63% 
IMG OID641262996 
Productfilamentation induced by cAMP protein Fic 
Protein accessionYP_001528302 
Protein GI158520432 
COG category[S] Function unknown 
COG ID[COG3177] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCGAG AACTCCAAGG CAGATACGTG ACCATATCGA CGGTAGGGGA GACGGCCAAG 
GCCTTTGTGC CTTCACCGCT GCCCCCGCGT CCGCCCATCA ACTGGACGCT GGAGTTGCGC
AGCAAGTTCG ACAAGGCACT GCTGGCGCTC GGACGGCTGG ACAGCGTCTC GACCCTGCTG
CCGGACACCT CGCTGTTCCT CTACATGTAC GTCCGCAAGG AAGCGGTGCT CTCCTCCATG
ATCGAGGGGA CCCAGTCGTC CCTGTCCGAC CTGCTGCTGT TCGAACTGGA TCAGGCGCCC
GGCGTGCCGC TGGATGACGT GCGGGAGGTC AGCAACTATG TCGCGGCCCT CGAACATGGG
CTGCGCCTGC TGGAGGAAGG GCTGCCGCTG TCGCTGCGGC TGCTCCGCGA GATCCATGGC
GTGCTGCTGA CCAAGGGGCG GGGCAGTATG CAGGCCCCGG GTGAGTTCCG CCGCAGCCAG
AACTGGATCG GCGGCACCCG GCCGGGCAAC GCGGCCTTTG TTCCGCCTCC GGCCGAAGAG
GTGCTGGAGT GCATGAGCAA GCTGGAGCTC TTCCTGCACG ACCAGCCGGA GCCGACCCCG
GTATTGCTCA AGGCGGCGCT GGCCCATGTG CAGTTCGAGA CGATCCACCC GTTCCTTGAT
GGTAACGGCC GTCTGGGGCG TCTGCTGATC ACGCTGCTGT TGTGTGAACA GAAGGTGCTG
CGGGAGCCGA TGCTCTACCT CAGCCTCTAC TTCAAAACAC ACAGGCAGTA TTACTACGAG
CTGCTCAACA ACGTGCGCCT GACCGGCGAC TGGGAAGCAT GGCTCGACTT TTTTGCCGAA
GCAGTGGTCG TTACCGCTAC CCAGGCGGTG GAAACCGCCC AGCAGCTTCT CGACCTGTCA
CGCCAGGACC GCGGCAAAAT CAGGGACCTC GGCCGGGCGG CGGCCTCGAC CCTGCAGGTT
CATCGGGGGC TGATGGAGCA TCCCATCGCC ACTTCGGGCT CACTGGTGGA AAAAACCGGT
CTCACCCCGG CCACGGTTAA CAAGGCGCTC GGCCACCTGG AAAAGCTCGG CATCGTCAAA
GAGCTGACCG CCCAGAAGCG TAACCGGTTG TTCAGCTATG CCGGCTATAT CGAGATCATG
AGTCGCGGCA CGGAACTACC GGGTACGAAT TGA
 
Protein sequence
MKRELQGRYV TISTVGETAK AFVPSPLPPR PPINWTLELR SKFDKALLAL GRLDSVSTLL 
PDTSLFLYMY VRKEAVLSSM IEGTQSSLSD LLLFELDQAP GVPLDDVREV SNYVAALEHG
LRLLEEGLPL SLRLLREIHG VLLTKGRGSM QAPGEFRRSQ NWIGGTRPGN AAFVPPPAEE
VLECMSKLEL FLHDQPEPTP VLLKAALAHV QFETIHPFLD GNGRLGRLLI TLLLCEQKVL
REPMLYLSLY FKTHRQYYYE LLNNVRLTGD WEAWLDFFAE AVVVTATQAV ETAQQLLDLS
RQDRGKIRDL GRAAASTLQV HRGLMEHPIA TSGSLVEKTG LTPATVNKAL GHLEKLGIVK
ELTAQKRNRL FSYAGYIEIM SRGTELPGTN