| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0383 |
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| Symbol | |
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| ID | 5693202 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 442006 |
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| End bp | 443739 |
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| Gene Length | 1734 bp |
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| Protein Length | 577 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641262964 |
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| Product | hydroxymethylbutenyl pyrophosphate reductase |
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| Protein accession | YP_001528270 |
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| Protein GI | 158520400 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGTAT CTATCGCAAA AACATCCGGT TTCTGCATGG GGGTGCGCCG GGCCGTGGAC
ATGGTGCTGG ACGCCTCCAA CCGGTACACC GAACCGATTT ACACCTTCGG TCCCCTGATT
CACAACCCCC AGGTGCTGCG GCTTCTGGCT GAAAAAAAGA TTTCAGTCAT GGAGACCATT
CCCGAACAGG GAAACGGCAT TGTGCTGATC CGGGCCCACG GGGTTCCGCC CCGGACCCGG
GAAAAACTGG AGGCGGCCGG CTTTACCGTC ATTGACGCCA CCTGTCCCCG GGTGGTAAAG
GTCCAGACCA TCATCTCCAG AAATGCGGCC GAAGGGTGCG CCGTCATCAT CATCGGCGAC
AAAGACCACC CCGAGGTGGT GGGCCTGCTG GGATATGCCG GCGACAGGGG GGTTGTGGCC
GACAGCCTGG AAGCGTTAAA GGCCCTGCCC GCCTTTGAAA AGGCCATCAT CGTGGCCCAG
ACCACCCAGA GCACCCGGCT TTTTGACGAG GTCGGCGCAT GGGCCGCGGC CCACCATCCC
CACTACCAGG TGTTCAACAC CATCTGTCCC TCCACGAAAA ATCGGCAGGC GGAAACCGAG
GCCCTGGCCA GACAAACCGA TGCCATGGTC GTGGTGGGAG GCTACAACAG CGGCAACACC
CAGCGCCTGG CTCAGGTTTC AAAAAAAAGC GGACACCCGG TGTTCCATGT GGAGACCAGC
GAAGAGCTGG ACACGAACGC CCTGGCCAAA TCCGACCACA TCGGCATCAC CGCCGGGGCC
TCCACACCCA ACTGGATCAT CAAGAAAATC TATCGCGAGC TGGAGGCGGC CCGGTTTCGC
TCAAAGGGGC CGCTGGCCCG CACGCTTTTT TCCGCCCAGC GGCTGCTGTT GCTCACCAAC
ATCTACCTGG CCATCGGTGC CGGCCTGCTC TGCTACAGTG CCTCCCTGCT GCGGCAGGGC
GAGCATTTTG CTCCCCACAT CCTCATCGCC ATGCTCTATA TCTTTTCCAT GCATACCTTG
AACCGACTCA CCGGCATTGC CGAGGATCAC TACAACGACC CCTACCGGGC CGCCTTTTAC
GACAAAAACA TGACCGTTCT GGCCCTGCTG GCCGTGGGGG CGGGGGGGCT GGGCCTGGCA
GTGGCTTTTT CCCTGGGTGT TTTCCCCTTT TTGATGCTTC TGGTGATGAG CGGCCTGGGG
CTTTCCTACA ATCTTTACCT GGTGCCCAAA GGCGTTACCG CCATTCCCTT CCGCCGCATC
AAGGACATTC CCGGTTCCAA GACCCTGCTG ATCTCCGCGG CCTGGGGCGT GGCGGTGTGC
GCGTTTCCCG CGGCGGCCAC CGATTCGCTC AACTTCTCCT CCATGTTTAC GGCCCTGTGG
CTGGCCGGCA TCGTGTTTGT CCGGTCCGCC TTTTTTGACC TGATCGACAT GCAGGGAGAC
AGAATCGCGG GCAAGGAGAC CCTTCCTGTT CTCATGGGGG CCGACCGGGC ACTGCGGTTT
TTAAAACAGA TGCTGGCCGG ACTTTTTCTT TTTCTGCTGG CGGCCACGCT GCTGGGCGTG
GTGTCAAGCC TGGGATACCT GCTGCTGGTG CTGCCGGTCA CCGGTTACAT GCTGCTGGCC
CTTTACCAGC GGGACACCCT GCAGAGCGGC CTGGTGCTGG AATTCCTGGT GGAGAGCCAG
TTTGTGCTGG CGGGCTTACT GGCCCTAACC TGGACCATGA TGACGGCTTT GTAA
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| Protein sequence | MKVSIAKTSG FCMGVRRAVD MVLDASNRYT EPIYTFGPLI HNPQVLRLLA EKKISVMETI
PEQGNGIVLI RAHGVPPRTR EKLEAAGFTV IDATCPRVVK VQTIISRNAA EGCAVIIIGD
KDHPEVVGLL GYAGDRGVVA DSLEALKALP AFEKAIIVAQ TTQSTRLFDE VGAWAAAHHP
HYQVFNTICP STKNRQAETE ALARQTDAMV VVGGYNSGNT QRLAQVSKKS GHPVFHVETS
EELDTNALAK SDHIGITAGA STPNWIIKKI YRELEAARFR SKGPLARTLF SAQRLLLLTN
IYLAIGAGLL CYSASLLRQG EHFAPHILIA MLYIFSMHTL NRLTGIAEDH YNDPYRAAFY
DKNMTVLALL AVGAGGLGLA VAFSLGVFPF LMLLVMSGLG LSYNLYLVPK GVTAIPFRRI
KDIPGSKTLL ISAAWGVAVC AFPAAATDSL NFSSMFTALW LAGIVFVRSA FFDLIDMQGD
RIAGKETLPV LMGADRALRF LKQMLAGLFL FLLAATLLGV VSSLGYLLLV LPVTGYMLLA
LYQRDTLQSG LVLEFLVESQ FVLAGLLALT WTMMTAL
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