| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0373 |
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| Symbol | |
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| ID | 5693192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 430413 |
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| End bp | 431771 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641262954 |
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| Product | DNA repair protein RadA |
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| Protein accession | YP_001528260 |
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| Protein GI | 158520390 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1066] Predicted ATP-dependent serine protease |
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| TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0711643 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACCG TTTTCTGCTG CCAGTCCTGT GGATACCAGG CCCCCAAATG GATGGGTCGC
TGCCCGGAGT GTGAAGGATG GGGCACCTTT GTGGAGGAGC CGGCCGACGG CTCGGCGTCG
GCTGCAAAAA GCGGCCGGGG GGTCAAGCCG GCGGAAGCCG TGGCCCTGGA TGCCATTGAG
CTGGCCGATG AAAGACGGAT TCACACCGCC ATCGGCGAAT TTGACCGGGT CCTGGGCGGC
GGCATCGTGG CCGGATCCCT GGTGCTGGTG GGCGGGGATC CGGGCATCGG CAAGTCCACC
CTGATGCTGC AGGCGGCCCA GAAACTGTCT GAAAACGGGT GCACCGTGCT TTACGTGTCC
GGCGAGGAGT CCCTTCGGCA GATCAAGATG CGCAGCCGGC GGCTCTGCCC GTCCCTCTCC
TCCTCCCTGC TGGCCGCGGC TGAAACCGAC ATCGAACGGG TGACGGCGCT GGCCCGGTCG
GCCAAACCCG ACGTGATGGT GATCGACTCC ATTCAGACCA TGTCCAGCGG CGATTTTTCG
TCGGCCCCGG GCAGCGTGGG CCAGGTGCGG GAGGCCACCA TGCGGCTGAT GGCCCTGGCC
AAGAAGACCG GCATCTGCGT GTTTCTTATC GGCCACGTGA CCAAGGACGG CAGCATTGCC
GGGCCCCGCA TCATGGAGCA CATGGTGGAC ACGGTGCTCT ATTTTGAGGG CGACAAGAAC
CAGGTGTTCC GCATTCTCCG GGCCGTGAAA AACCGGTTCG GCTCCACCAA CGAGATCGGC
GTGTTTGAGA TGCGCACCGA GGGGCTGGGC GAGGTGGCCA ACCCGTCGGC GGTGTTTCTG
TCGGAAATGC CTGAAAAAAC ACCGGGGTCC GTGGTAACGG CCAGCATGGA GGGCACCCGG
CCCATCCTGG TGGAGCTTCA GGCCCTGGCC AGCCGCACCA GCCTGGGCAT GGCCCGCCGC
ACCATCCTAG GCCTGGACGC CAACCGGGTG GCCCTGCTGG TGGCGGTGAT GGAAAAAAAG
CTCGGCATGG AGCTGACCGG GTATGACGTG TTTATGAACG TGGCCGGCGG GGTCCGGGTC
AGTGAGCCGG CCGTGGACCT GGCCGTGATC GCGGCCGTGG CCTCCAGCTT TCTGGACCGC
CCTATCCCAA CCGGCACCGT GGTGCTGGGC GAGGTGGGGC TCACCGGCGA GGTGCGGGCC
ATCAACCATA TTGATACCCG GGTGGGAGAG ATCAAGAAGA TGGGCTTTAC CGCCTGCCTG
CTGCCCCAGG GCAATCTCAA GCGCATGTCC CGCGACAAAG AGATCAAGGT TACCGGTGTC
GGCACCGTGG CCGAGGCTAT GGAGGTCTTA TTTCAATGA
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| Protein sequence | MKTVFCCQSC GYQAPKWMGR CPECEGWGTF VEEPADGSAS AAKSGRGVKP AEAVALDAIE
LADERRIHTA IGEFDRVLGG GIVAGSLVLV GGDPGIGKST LMLQAAQKLS ENGCTVLYVS
GEESLRQIKM RSRRLCPSLS SSLLAAAETD IERVTALARS AKPDVMVIDS IQTMSSGDFS
SAPGSVGQVR EATMRLMALA KKTGICVFLI GHVTKDGSIA GPRIMEHMVD TVLYFEGDKN
QVFRILRAVK NRFGSTNEIG VFEMRTEGLG EVANPSAVFL SEMPEKTPGS VVTASMEGTR
PILVELQALA SRTSLGMARR TILGLDANRV ALLVAVMEKK LGMELTGYDV FMNVAGGVRV
SEPAVDLAVI AAVASSFLDR PIPTGTVVLG EVGLTGEVRA INHIDTRVGE IKKMGFTACL
LPQGNLKRMS RDKEIKVTGV GTVAEAMEVL FQ
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