| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0360 |
|---|
| Symbol | |
|---|
| ID | 5693179 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | - |
|---|
| Start bp | 413137 |
|---|
| End bp | 414036 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641262941 |
|---|
| Product | alpha/beta fold family hydrolase |
|---|
| Protein accession | YP_001528247 |
|---|
| Protein GI | 158520377 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1075] Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAC TGGTAGCCCT TTTAATTGTT GGACTCTTTG TAAGCATCAG CCTGACAGGT
CTTGGCCTGG CCGGAGGCAC AGCTCCCTAC AAATGCGACA CCCGCTATCC TGTCGTTCTC
GCCCATGGCA TGGGCGCTTC GACCAAAATC CTCGGTATCG TGGATTACTG GTACGGCATT
GAGGACGCTT TGAAGGCTGA AGGAGCCAGT GTTTATTTTA CTTCGGTCAA CGCCATGGGC
AGCACCGTCG ACAAGGCGGC CGACTTCAAG CAACAGTTCA TGGAAATTCT GGCTGTCACG
GGCGCACCCA AAGCCAATAT CATCGGCCAT TCCCATGGCA CCCTCTATAC CCGCTACGCC
ATCTCCAACC TCGGCCTGGC GCCCTATGTG GCGAGCTACA CCAGCCTGGC CGGTCCTCAT
CGGGGCAGCG CCGTCGCCTC TTTAATCATG TATGACCTTC CGGACTGGCT GCTGGCCGCC
GGTGGCGATG TGCTCAATTT TGTGTACACT TTTATTTTTG GCGACACCAA TCCCGATTCC
CTTCAGAACG CGCTTGATCT CTGCCCGGAC TACATGGTCA ACACCTTTAA TCCAAATACG
CCCAACATAC CCGGCATCTA CTACCAGAGC TGGGCCGCCA AGGCCAAAAC CTCCTGCCCG
AGCGTCATTC TGGAGCCGAC CTGGCTGATC ATGCTGATCG AGGAAGGCGC CAATGACGGG
CTGGTCAGTG TGGAAAGCGC CAAGTGGGGC AACTTCCGCG GGGTGGAAGA CGCCGCCTGG
TACAGCGCCG GATGCGATCA TCTCAACATC GTCGGCCAGT TGTTCGGCGT AACCCCGGGA
TTTGACGCGC CGCAGTTTTT CGTGGATATT GTAGAAGACC TTAAGGGGCG CGGCTATTAA
|
|---|
| Protein sequence | MKKLVALLIV GLFVSISLTG LGLAGGTAPY KCDTRYPVVL AHGMGASTKI LGIVDYWYGI
EDALKAEGAS VYFTSVNAMG STVDKAADFK QQFMEILAVT GAPKANIIGH SHGTLYTRYA
ISNLGLAPYV ASYTSLAGPH RGSAVASLIM YDLPDWLLAA GGDVLNFVYT FIFGDTNPDS
LQNALDLCPD YMVNTFNPNT PNIPGIYYQS WAAKAKTSCP SVILEPTWLI MLIEEGANDG
LVSVESAKWG NFRGVEDAAW YSAGCDHLNI VGQLFGVTPG FDAPQFFVDI VEDLKGRGY
|
|---|
| |