| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0333 |
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| Symbol | |
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| ID | 5693152 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 381822 |
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| End bp | 382877 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641262914 |
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| Product | type IV pilus assembly protein PilM |
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| Protein accession | YP_001528220 |
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| Protein GI | 158520350 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4972] Tfp pilus assembly protein, ATPase PilM |
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| TIGRFAM ID | [TIGR01175] type IV pilus assembly protein PilM |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.872889 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTTTCG GAAAAAAGGA TCATCTGGTG GGGCTTGACA TCGGCTCCAG CGTGGTCAAG
GTCGCGGAGG TGGCCGTCTC CTCCTCTGGT CGAAGCCTGC TGCGGTTCGG CACCCTGGAA
ATGCCGGCAG GCGCCATTGT GGAGGAGGGC ATCAAGGATC CGGAGGTGGT GGCCGCCACC
ATAAAAGAGC TTTTTTCACT CTATAATATA AAGGAAGACC GGGTGGCGAT CTCCATCGGC
GGATACTCGG TAATTGTCAA AAAGATCAAC GTGCAGAGCA TGAGTGAAGA GCAGCTTCAG
GAAGTGATCG CCGTTGAGGC GGAGCAGTAT ATCCCTTTTG ACATCAACAA CGTGAATTTG
GATTTCCAGA TTCTGGGCGA CAATGACCAG AACCCCAACC AGATCGATGT GATGCTGGTG
GCGGCCAAAA AAGAGACGGT CAACGATTAC CTTAACGTCA TCGATATCGC CGGGTTGACG
CCGGTGATCA TTGATGTGGA CGCCTTTGCC CTTCAAAACA TTTACGAAGT CAACTATGAG
GCCGAGGAGA ACTGCGTTGC CCTCATCGAC ATCGGGGCCA ACAAGACGTC ACTCAATATT
CTGAAGGGCA GCAAATCGGT ATTCATGCGG GATGTCTCCT TTGGGTGCAA TCAGATCAAT
CATCATATCG CCACCAAAAT CAACTGCAGC CTGGAAGAAG CAGAAGAGCT GAAGCTCAGC
GACAAGCAGG AGCGCATCTC AACCGACGAG CTTAACAGCA TCATCTCTTC GGTGGTGTCC
GACTGGACCA CCGAAATCCG GCGGGCCCTG GATTTCTTTT ATTCCACCTA CTCCAACGAT
CATCTCAAGT GTATATATTT AAGCGGCGGC GGATCCAACA TCCCCGAATT CAGGCAAATG
CTGGCGTCCC AAACCTCCTC GGAGCTGGAA ATACTTAATC CTTTCAGCAA CTTCGACGTC
AAGGACGACC GGCTGGATTC GGCTTACCTG AAACAAATCG CACCCCAGGC AGCCATCTGC
ATGGGGATTG CCATCAGACG GGTGGATGAC AAATGA
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| Protein sequence | MLFGKKDHLV GLDIGSSVVK VAEVAVSSSG RSLLRFGTLE MPAGAIVEEG IKDPEVVAAT
IKELFSLYNI KEDRVAISIG GYSVIVKKIN VQSMSEEQLQ EVIAVEAEQY IPFDINNVNL
DFQILGDNDQ NPNQIDVMLV AAKKETVNDY LNVIDIAGLT PVIIDVDAFA LQNIYEVNYE
AEENCVALID IGANKTSLNI LKGSKSVFMR DVSFGCNQIN HHIATKINCS LEEAEELKLS
DKQERISTDE LNSIISSVVS DWTTEIRRAL DFFYSTYSND HLKCIYLSGG GSNIPEFRQM
LASQTSSELE ILNPFSNFDV KDDRLDSAYL KQIAPQAAIC MGIAIRRVDD K
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