| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0330 |
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| Symbol | |
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| ID | 5693149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 379659 |
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| End bp | 380639 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641262911 |
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| Product | hypothetical protein |
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| Protein accession | YP_001528217 |
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| Protein GI | 158520347 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3168] Tfp pilus assembly protein PilP |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000177354 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCGCG TGCGTAAAAA CCTTATTATC TGTTTAGTGT GTGTCTGCCT GGCGGCGGGT
GTGGGATGCA AGAAGGGGGC TGACAACCCC CCGGAGCAAG CCGAGCCTGC GCGGCAGACC
ATTTCCATGG AACAGCCGGC GCCGGCCCCC CCGGCGGAAC AACCGACAGC GCCTGAGGTG
ATGGTTGTTG AAGAGGAGGC TCCGGGACCA ATGGTGGTGA CAGGCACGCC GCAGGTTCCG
GCCGAAACAA CGCCCCCGGC ATCCGGACCG GCAACAGAAA CAGAACCGGT GGCAAAAAAG
GCGGCCGAAG GGCCTTCGGC CGAGGAGCAG CAGGCACCGT CCGATATGCC GCCCACACCT
GCTGAGGAGC CGCCGGCCCC ACCGGTGGAA GCCGTTTCCG ATTCCCCGGC GCTGACGGAT
ACAGCCGATC CGGAAGAAAC GGATATCGCC CTGCCGACAT CGGAAGTGGA AGCAGGCGCG
GGAACAGTGG ATGGCACTGC CATGGAAACA ACGGATGAAA TGGAAGAAGC GCCTGCTGAC
GACGTTGCGT CTGAAATCAA AATCGTGATC GACCTGATGG GAGAAGAGGA CCTTGATGCT
GAAGAAGCCG CCAAGACAAC GGCCGAGAAC CAGGCGCTGG CCATGTTCAG CCCGTTTACT
CCCCTTTTCC AGAAAGACGC AAGCGAAGAT GACATGTTTC TGGAACAGGA CTCCCAGCGG
AAACGGGCCT TTTTAACCCC CCTGGAGCGA ATCAGCCTGG GCCAGTTACA ACTGTCCGGC
ATCATCCGGG CCGCCAGCGG CAACCGGGCC ATTGTGACCG ACGCCACAGG CAAGGGATAT
GTGGTCAAAA AAGGTACCTA CATCGGGCTG AATTCCGGCC AGGTGGAAGA GATTGTGGAT
GATCGCGTGA TTGTTGTAGA GATGGTCGGC GGACGCAGGG CCGTAACCGA ATTGAAACTT
CAGAAACCAG CTGGAGAATA G
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| Protein sequence | MMRVRKNLII CLVCVCLAAG VGCKKGADNP PEQAEPARQT ISMEQPAPAP PAEQPTAPEV
MVVEEEAPGP MVVTGTPQVP AETTPPASGP ATETEPVAKK AAEGPSAEEQ QAPSDMPPTP
AEEPPAPPVE AVSDSPALTD TADPEETDIA LPTSEVEAGA GTVDGTAMET TDEMEEAPAD
DVASEIKIVI DLMGEEDLDA EEAAKTTAEN QALAMFSPFT PLFQKDASED DMFLEQDSQR
KRAFLTPLER ISLGQLQLSG IIRAASGNRA IVTDATGKGY VVKKGTYIGL NSGQVEEIVD
DRVIVVEMVG GRRAVTELKL QKPAGE
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