| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0317 |
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| Symbol | |
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| ID | 5693136 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 362964 |
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| End bp | 364373 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641262898 |
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| Product | glutamate synthase (NADPH), homotetrameric |
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| Protein accession | YP_001528204 |
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| Protein GI | 158520334 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01316] glutamate synthase (NADPH), homotetrameric |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000287651 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGATA CAGAAAAAAA AGAGAAAACG CCCCGGCAGC CCATGCCGGA GCAGCCGCCC
AAAGTACGGG CGAAAAACTT TGACGAAGTG CCCCTGGGAC TCTCCCCGGA AGCGGCTGTG
GCCGAGGCCT CCCGGTGCAT TCAGTGCAAG AGCCCGGCCT GTGTGGAAGG GTGCCCGGTA
CGGGTGGACA TTCCCGGGTT TATTCGGTTG GTTAAAGACA ACGACTTTAC CGGCGCCATC
AGCAAAATCT GGGAGCGAAA CGGCCTGCCC GCTGTATGCG GCCGGGTCTG TCCCCAGGAG
GCCCAGTGCG AAGGAAAGTG CATTCTCGGC AAAAAAGGCG ACCCCGTGGC CATCGGCAAC
CTGGAGCGGT TTGCCGCGGA TCACGAGCGG GCCAACCGCA AGGCCCCGGT TCCGGAAAGG
GCCCCTGCCA CGGGCAAGAA AGTGGCGGTG GTGGGCTCCG GCCCCTCCGG CCTGACCGTT
GCCGGGGATC TGCTGTTAAA GGGCCATGAT GTCACCATTT TTGAAGCGTT TCACCGGCCC
GGCGGTGTCC TGGTGTACGG CATTCCCGAG TTCCGGCTGC CCAAAGAGAT TGTGTTCTCC
GAAGTGGACG GTCTTGAGAC CCTGGGCGGC AAGGTGGAGA CCAACGTGGT GGTGGGCCGC
AGCGTCACCG TGGACGAACT GTTCGAGCAG GGCTATGACG CGGTGTTTCT GGGTGTGGGC
GCCGGCCTGC CCATGTTTCT GAACGTGCCC GGCGAAAACT TTGCCGGCGT GTTCTCCGCC
AACGAATACC TGACCCGCAC CAACCTGATG AAGGCTTACC GGTTCCCCGA ATATGACACG
CCGGTGATCC GGGGCAAAAA CGTGGTCACC GTGGGCGGGG GCAATGTGGC CATGGACGCG
GCGCGCACAG CCCTGCGCCT GGGTGCGGAA AACTCCTACA TTGTATACCG CCGGTCCAAG
ACCGAACTGC CGGCCCGGGC CGCGGAAGTT CACCATGCCG AAGAAGAAGG GGTCCAGTTC
AAGCTGCTGA CCAACCCCAC ACAGTTTTTC GGCGACGACA ACGGCCGGGT CATCGGCATG
GAGGCCCTGC AGATGGAGCT GGGCGAGCCG GACGCGTCGG GCCGCCGCCG GCCCGTTGAG
ATCAAGGGGT CGGAGTTCCG CATTGACTGC GACCTGGTGA TCATCGCCAT CGGCGCCGGT
GCCAACCCCC TGCTGACCCA ATCCACCGAA GGGCTGGAAT TAAACAAATG GGGCTATGTC
GTGGCCGATG AAAAAACCGG CAAAACCACC CGGAAAGGGG TCTGGGCCGG GGGTGACATC
GTCACCGGAT CGGCAACGGT CATTCTGGCC ATGGGTGCCG GCCGCGTGGC CGCCGACTCC
ATTCACGACT ATTTGACGAT TGGATGGTAG
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| Protein sequence | MADTEKKEKT PRQPMPEQPP KVRAKNFDEV PLGLSPEAAV AEASRCIQCK SPACVEGCPV
RVDIPGFIRL VKDNDFTGAI SKIWERNGLP AVCGRVCPQE AQCEGKCILG KKGDPVAIGN
LERFAADHER ANRKAPVPER APATGKKVAV VGSGPSGLTV AGDLLLKGHD VTIFEAFHRP
GGVLVYGIPE FRLPKEIVFS EVDGLETLGG KVETNVVVGR SVTVDELFEQ GYDAVFLGVG
AGLPMFLNVP GENFAGVFSA NEYLTRTNLM KAYRFPEYDT PVIRGKNVVT VGGGNVAMDA
ARTALRLGAE NSYIVYRRSK TELPARAAEV HHAEEEGVQF KLLTNPTQFF GDDNGRVIGM
EALQMELGEP DASGRRRPVE IKGSEFRIDC DLVIIAIGAG ANPLLTQSTE GLELNKWGYV
VADEKTGKTT RKGVWAGGDI VTGSATVILA MGAGRVAADS IHDYLTIGW
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