Gene Dole_0314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_0314 
Symbol 
ID5693133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp359227 
End bp361020 
Gene Length1794 bp 
Protein Length597 aa 
Translation table11 
GC content58% 
IMG OID641262895 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_001528201 
Protein GI158520331 
COG category[I] Lipid transport and metabolism 
COG ID[COG1022] Long-chain acyl-CoA synthetases (AMP-forming) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000490287 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCATCA AGGATTATAA AAATATTCAT GAAATGCTCA AGGAGACGAT TGACGCCCGC 
GCCGACCAGA CCGCCTACCG GTGGTTCCGT GAGGCCGGTG TGACGGACTC AATCACCTGG
GCCGGGTTTT ACGACCAGGT CCGGCAGGCG GCCAAAAGCC TTATTGCCCT GGATGTAAAC
AAACAGGACA AGGTCAACAT TCTCAGCTAC ACCTGTTATC AGTGGGTGCT GTGCGACATG
GCCATTGCCT CCTGCAACGG GGTCACCGTG GGCATCTACC AGTCCAACCT GCCCCATGAC
TGCAAATACA TCATCAACCA TTCGGACGCG GTGGTGATCT TTGCCGAGGA CCAGAAACAA
CTCGATAAGC TGCTCTCCAT TCGGGCCGAT ATTCCCAACA TTCGTAAGGT GATCCTGTTT
AAAGGCAAGG GGACCGGAGA TGGCTGGGCC ATCAGCTTTG ACGAGTTCCT GGCCCTGGGA
AAGGATGTGG CCGACGAAAA ACTCAAGGAA CGCATTGACG CGGCCGGCCC GTCGGACCCG
GCCGCCATTG TCTACACATC CGGCACCACC GGCGTTCCCA AGGGCGCCGT GCTGACCCAC
GACAACCTCA CCTTCACGGC CCAGTCAGCC AGGGAGTGCG CCGATATTCA CGAAGGAGAC
AACACCTTCC TGTTTCTCCC CCTGGCCCAC GTGTTTGCCC GGCTCTGCGT CTACTTCTCC
GTGCTGACCG GAACCTGCAC CACCTTTGCC CGCAGCATCG ACACCCTGGT GGACGACCTG
AAGGCATCCG AGCCCGACTG GTTTGCCAGC GTGCCCCGCA TCTATGAAAA AGTTTACGCC
AAGGTGATCA GCGGCGCCGA AGCCAAGGGC GGCCTGGCCC TGAAAATTTT CCGGTGGGCC
TGCACCGTGG GCAACGAGAT CAGTGACCGC CGGCTCAACA AACAACCCAT TCCCGCGGGA
ACGGCCTTTA AATACAAGAT CGCCACCAAG CTGGTGTTCT CCAAGCTTCA GGCGGCCCTG
GGCGGCCGGG TACGGTGGTG CATCAGCGGC GCCGCACCGC TGAACCCCGA TATCGCCAAG
TTTTTTCATG CCGCCGATGT GCTGATCCTG GAAGGCCTCG GCATGAGTGA AAACACCTCC
TTTACCAACG TCAACCGGGT GGACAACTAC CGGTTTGGCT GGGTGGGCCA GCCCGGCCCC
GGCATTGAGC AGAAGATCGC CGAAGACGGA GAAGTCCTGT TTCGCGGCCG AAACGTCATG
AAAGAGTACT ACAAGATGCC CGAGGAGACG GCCAAAACCA TTGCCCCGGA CGGCTGGCAA
TCCACCGGCG ACCTGGGCGA GATCGACGAC CAGGGATTTT TGCAGATCAC CGGACGGAAA
AAGGACCTGA TCATCACCGC CGGCGGCAAG AACATCGCGC CTTCGGCCAT CGAAGGGGTG
ATCGCCACCT CCAAGTATAT CGCCCAGGTC ACGGTGATCG GGGACCGGCG AAAATACCTG
ACCGCGCTGG TGGTGATGGA CCCGGAAACC GTGGCTGAAT ACGCACAGAG CAACAACATT
GCCTTTACCG ACATCAACGA CCTGGGTCAG AAACCCGAGA TTCTCAAGCT GATCGAGACC
GAGGTGGCGG AAAAGAACAA GGCCTTTGCC TCGTTTGAAA ACATCAAAAA GGTGACCATC
GTGCCGGAGT TCACCATTGA CAACGGCCTG ATCACCCCCA CCTTCAAGAT CAAGCGCAAC
GTGGTTATGG AGCGGTTTGC CGAAAAGATC GACGCCATGT ATCCCAAGGA CTGA
 
Protein sequence
MAIKDYKNIH EMLKETIDAR ADQTAYRWFR EAGVTDSITW AGFYDQVRQA AKSLIALDVN 
KQDKVNILSY TCYQWVLCDM AIASCNGVTV GIYQSNLPHD CKYIINHSDA VVIFAEDQKQ
LDKLLSIRAD IPNIRKVILF KGKGTGDGWA ISFDEFLALG KDVADEKLKE RIDAAGPSDP
AAIVYTSGTT GVPKGAVLTH DNLTFTAQSA RECADIHEGD NTFLFLPLAH VFARLCVYFS
VLTGTCTTFA RSIDTLVDDL KASEPDWFAS VPRIYEKVYA KVISGAEAKG GLALKIFRWA
CTVGNEISDR RLNKQPIPAG TAFKYKIATK LVFSKLQAAL GGRVRWCISG AAPLNPDIAK
FFHAADVLIL EGLGMSENTS FTNVNRVDNY RFGWVGQPGP GIEQKIAEDG EVLFRGRNVM
KEYYKMPEET AKTIAPDGWQ STGDLGEIDD QGFLQITGRK KDLIITAGGK NIAPSAIEGV
IATSKYIAQV TVIGDRRKYL TALVVMDPET VAEYAQSNNI AFTDINDLGQ KPEILKLIET
EVAEKNKAFA SFENIKKVTI VPEFTIDNGL ITPTFKIKRN VVMERFAEKI DAMYPKD