Gene Dole_0309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_0309 
Symbol 
ID5693128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand+ 
Start bp353467 
End bp354090 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content58% 
IMG OID641262890 
ProductRnfA-Nqr electron transport subunit 
Protein accessionYP_001528196 
Protein GI158520326 
COG category[C] Energy production and conversion 
COG ID[COG4660] Predicted NADH:ubiquinone oxidoreductase, subunit RnfE 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.00114498 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGACCG AACCCACACC GATGGAAAGA TTTTTACAGG GCATTATTCC GGAAAATCCG 
GTCTACCGCC AGCTGCTGGG CCTCTGCCCC GTACTGGCGG TCACTGGCAA CATGCAGTCG 
GCCATGACCA TGGCCGGGGC CGTTCTTTTC GTGCTTTTCT GTGCCAATGT GATGATCAGC 
CTGATTCGCA ACATTTTAAA ACCCCATCTG CGGATTGTTA TTTTCACCCT GACCATCGCC 
ACCTTTGTAA CCATTGTGGA CCGGTTCCTG GCCGCCTACA TGTACAACAT GAGCAAGGCG 
CTGGGCCCCT ACATCCCGCT GATCATCGTG AACTGCATCA TCATCTGCCG GTGCGAGGTG 
TGCGCCTCCA AACAGTCGGT GTTCCATGCC GGGGCCGATG CCATCGGCCA GTCCCTGGGG 
TTTGCCCTGG CCCTGGCCAG CATCGCCACC GTTCGGGAGA TCCTGGGCAC TGGCATGTTT 
TTCGGTCTTC CCGTGCTGCC GGATGTCTGG CCCGACTGGG TCATCATGGC CCTGCCGCCC 
GGCGCGTTTT TCACCTTCGG CCTGCTGCTG GGCCTGGTGA ACTGGTTTAC GGCCAACAGA 
GCCAAAAAAG AAAAAAACAG CTAA
 
Protein sequence
MSTEPTPMER FLQGIIPENP VYRQLLGLCP VLAVTGNMQS AMTMAGAVLF VLFCANVMIS 
LIRNILKPHL RIVIFTLTIA TFVTIVDRFL AAYMYNMSKA LGPYIPLIIV NCIIICRCEV 
CASKQSVFHA GADAIGQSLG FALALASIAT VREILGTGMF FGLPVLPDVW PDWVIMALPP 
GAFFTFGLLL GLVNWFTANR AKKEKNS