| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0306 |
|---|
| Symbol | |
|---|
| ID | 5693125 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | + |
|---|
| Start bp | 350375 |
|---|
| End bp | 351739 |
|---|
| Gene Length | 1365 bp |
|---|
| Protein Length | 454 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641262887 |
|---|
| Product | electron transport complex, RnfABCDGE type, C subunit |
|---|
| Protein accession | YP_001528193 |
|---|
| Protein GI | 158520323 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG4656] Predicted NADH:ubiquinone oxidoreductase, subunit RnfC |
|---|
| TIGRFAM ID | [TIGR01945] electron transport complex, RnfABCDGE type, C subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.521272 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGGCTGA AATTAGCAGG CTTTGAAGGC AGCGGCACCT TTGCAAAGGG TGTCCACCCG
CCGGGCCATA AAAACTTTTC ACAGGATGTG CCGATTGAGG TGGTGCCGAC CCCGGCAAAG
GTTGTGGTGC CGCTGATGCA GAACATCGGC GCGCCCAGCG AATGCGTGGT CAAGGCCAAG
CAGGACGTGA CGTTCGGTGA GATGATCGCC AAGGCCACCG GGTTTGTGTC GGTGCCGATT
CATTCGCCCA TCAACGGCAA GGTACAAAAA GTATTAAACG TGACCCTTCC CAACGGACGC
CATGTGCCGG CAGTGCCCAT CAAGGCCGAC GGCGACCAGC TGGAAGGCGC GGCCCTGATG
GAAGAGATTC TGGGCGGGGA CTGGCCCAAA GACGCGGCGG ACAAGCATGA CCCCAAGGCC
ATTTCCGAGG CCATTTCCGC GGCGGGCATC GTGGGGCTCG GCGGTGCCGC CTTTCCCACC
CATGTAAAAA TCATGCCCAA CGACAAGCGG CCCGTGGACG CCCTGCTGAT CAACGGCTGC
GAATGCGAAC CCTTTCTGAC ACCGGACTAC CGGATCATGG TGGAAGCAGC GGACGCCGTG
ATATGCGGCG CGCTGCTGGC CGGCCGGGCC GTGGGCGCAA AACAGATTGT GGTGGGCATC
GAGGCCAACA AGCCCAAGGC CGTGGAGGCC ATGACCCGGG CGGCCCAGGG AACCGCCGTA
AAGATCGCGG TGCTGAAAAC CAAGTATCCC CAGGGCAGTG AAAAACACCT GATCATGGCG
GTGATGAAAC GAAAAGTACC GCCCGGAAAG CTGCCCCTGG AAGTGGGAGC CGCGGTCAGC
AACGTGGGCA CGGTGGTGGC CGTGGCCCGG GCCGTGCTCC GGAAAAAGCC CCTGACCCAC
CGGGTGGTGT GCGTCACCGG CGGCGGCATC GTGCAGCCCA AGAACCTGCT GGTGCCTATC
GGCATCAGCT ACGGTGAACT GATTGAGTTC TGCGGCGGAC TGAGGCCCGA AGCGGCCCGC
ATCGTCTCCG GCGGCCCCAT GATGGGGTTT GCCTTTACCG ACATGGAGAT GCCGGTCACC
AAGGGCGCCA GCGGCGTGAC CGTGCTGACC CGGGATGATG TGAAAAAAGC CGAAGAGACC
GCCTGTGTCC GTTGCGGCCG GTGCGTGGAT GTGTGTCCCC TGAACCTGGT GCCCAGCAAG
TTGGCCGTCG CCAGCCGGAA TAAGAACCTG GAAGTGGCGG AGCGATACAA TATCTTTACC
TGCCTGGAGT GCGGCTGCTG CGCCTACACC TGTCCGGCCA GCCTCCCCCT GGTCCAGCTG
ATCCGTATGG GCAAGGCGGC TATCATGGCC ACCAGGAAAA AATAA
|
|---|
| Protein sequence | MGLKLAGFEG SGTFAKGVHP PGHKNFSQDV PIEVVPTPAK VVVPLMQNIG APSECVVKAK
QDVTFGEMIA KATGFVSVPI HSPINGKVQK VLNVTLPNGR HVPAVPIKAD GDQLEGAALM
EEILGGDWPK DAADKHDPKA ISEAISAAGI VGLGGAAFPT HVKIMPNDKR PVDALLINGC
ECEPFLTPDY RIMVEAADAV ICGALLAGRA VGAKQIVVGI EANKPKAVEA MTRAAQGTAV
KIAVLKTKYP QGSEKHLIMA VMKRKVPPGK LPLEVGAAVS NVGTVVAVAR AVLRKKPLTH
RVVCVTGGGI VQPKNLLVPI GISYGELIEF CGGLRPEAAR IVSGGPMMGF AFTDMEMPVT
KGASGVTVLT RDDVKKAEET ACVRCGRCVD VCPLNLVPSK LAVASRNKNL EVAERYNIFT
CLECGCCAYT CPASLPLVQL IRMGKAAIMA TRKK
|
|---|
| |