| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0288 |
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| Symbol | |
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| ID | 5693106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 331373 |
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| End bp | 332584 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641262868 |
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| Product | integrase family protein |
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| Protein accession | YP_001528175 |
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| Protein GI | 158520305 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGAGGATA AGCTGATGGC GAAAAAACAA GACAGGTATT TGCAGAAGCG TGACAACACC
TTTTATTTCC GTAAAAAGCA TAATGGCAAA GTGTTTAAGC GATCATTGAA TACAACTGAC
AAGCGGACAG CTAGGGACCT TCGGAATTTT TACCTCAGAA ACCTCGTTGA ATACGGACAA
CTGGATGCAC CTGAAAAGGT GGACTATGAT GTCATCACTT TCGGGGAGGT TGCGAAAGAA
TGGGCTTCCA TACACAAGAA AGAGGTTCGG TATTCTACGT GGCCGGATTA CGTGTCATCA
ATGAACGGTC ATATCCTGCC TAATTTCAAA GACATGCCAA TAGCTGAAAT CACCTACGGA
GATGTGCTGA AATTCAGAAG CGGGTTGAAG GTTGGAGCCA AAAGAGCGAA CAACATTTTA
GTGCCAATGA AATCTGTTTT TGATTATGCT GATAGGGAAG GGATTATTCA GGATAACGTG
ATGCGGAAGA TAAAACGACT TTCAGAAGAA GCACCGGAGA TTCATCCTTT CTCTTATGAT
GAGGTCAATC GACTTCTAGA CGCAGTGCAT CCCTGGTATC AACCGTATTT GATTGTAGCG
TTTTTTACGG GCATGCGGGC GGGAGAGCAA AATGGTCTGT GTTGGTCAGA TTTTCTTGAA
GATATGCAAC CAGAGCCACG GATTTTTATC CGTAAAACGT ATGTGTATAA AAAGGACGGC
ATCCCGAAGA CCAAAAAGTC AAAGCGTTAT ATAAAGTGTC TTCCGCAGGT GCTTGAGGCT
CTATCGGAGC AACGGAAACT GACCGGTAAA AATAAACATA TCTTTCTGAC CATTGACGGA
AGACGGATGA CCCCGGATCA CATCCGGAAG GAGGTATGGA TTCCCGCACT AGAAAAGGCG
GGTATTGAAT ATCGTCCGCC CATTCAGACA AGGCATACTT TCGCTACCAT GATGCTTTCT
GCCGGTGAGG ATATTGGTTG GGTCCAGAAC ATGCTTGGAC ACTCCTCGTT GCAGATGATT
TTCCAGCGGT ATTATGCCTG GGTACCGGAG AAAACCCGTT CAGACGGTCA TGCGTTCATG
AAGTACGTTG GATGCCTATC CGTAACGCAA AAACAGGATG CCGGGAGTGC AGGTGAGATA
AAGGTAAAAA CGGACGAAGG GTGTACCAAT CTTGTACCAC TGGACAAATA TAGGCATAAA
AAAAGAGGCT AG
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| Protein sequence | MEDKLMAKKQ DRYLQKRDNT FYFRKKHNGK VFKRSLNTTD KRTARDLRNF YLRNLVEYGQ
LDAPEKVDYD VITFGEVAKE WASIHKKEVR YSTWPDYVSS MNGHILPNFK DMPIAEITYG
DVLKFRSGLK VGAKRANNIL VPMKSVFDYA DREGIIQDNV MRKIKRLSEE APEIHPFSYD
EVNRLLDAVH PWYQPYLIVA FFTGMRAGEQ NGLCWSDFLE DMQPEPRIFI RKTYVYKKDG
IPKTKKSKRY IKCLPQVLEA LSEQRKLTGK NKHIFLTIDG RRMTPDHIRK EVWIPALEKA
GIEYRPPIQT RHTFATMMLS AGEDIGWVQN MLGHSSLQMI FQRYYAWVPE KTRSDGHAFM
KYVGCLSVTQ KQDAGSAGEI KVKTDEGCTN LVPLDKYRHK KRG
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