Gene Dole_0271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_0271 
Symbol 
ID5693089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp309555 
End bp310406 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content61% 
IMG OID641262851 
Product3-hydroxybutyryl-CoA dehydrogenase 
Protein accessionYP_001528158 
Protein GI158520288 
COG category[I] Lipid transport and metabolism 
COG ID[COG1250] 3-hydroxyacyl-CoA dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.528699 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGTTA AAACCATAAT GGTTATCGGC GCCGGCCAGA TGGGCAACGG CATCGCCCAG 
GTGGCGGCCC AGGCCGGTTA TACCACCTTT ATGAACGATA TCTCCGAAGA CCTGGTGGAC
AGGGGCATGA CCGCCATTGC CGGCAGCCTG GACCGGATGG TTAAAAAAGA AAAAATCACG
GCTGACGACA AGACCGCCAT CCTGGGCCGG ATCACACCGG CGGTGACCCT GGACCCGGCG
TCCGAATGCG ACCTGGTAAT AGAGGCGGTG GTGGAAAAAA TGTCGATCAA GGCCGATATT
TTCAGCGCCC TGGACCGGCT GGCCCCTGGC CACGCCATTC TGGCCAGCAA CACATCCTCG
CTTCCCATCA CCGGCATTGC CGCCCATACC GGACGGCCGG AAAAGGTGAT CGGCATGCAT
TTTATGAACC CTGTGCCGGT GATGAAGCTG GTGGAGGTCA TCAACGGCCT GGCCACGACC
CCGGAGGTGA CGGCCACGGT GCGCGCGGTG GCCGAAGCCA TGGGCAAAAT ACCGGTGGAG
TGCCGGGACG TGCCCGGATT TGTCTCCAAC CGGGTGCTCA TGGTCATGAT CAACGAGGCC
CTGTGGGAAC TTTACGAAGG CGTGGCCACG GCCGAAGGCA TCGACCAGAT TATGAAGCTG
GGCATGAACC ATCCCATGGG TCCCCTGGCC CTGGCCGACC TGATCGGCCT GGACACGGTG
CTGGCCATTC TGGGCGTGCT TCAGGACGGG TACGGCGACC CCAAGTACCG GCCCTCTCCG
CTGCTCAAGT CCTACGTGGC CGCCGGCTGG CTGGGCCGCA AAACCGGCAG GGGTATCTAC
GAATATAAGT AA
 
Protein sequence
MEVKTIMVIG AGQMGNGIAQ VAAQAGYTTF MNDISEDLVD RGMTAIAGSL DRMVKKEKIT 
ADDKTAILGR ITPAVTLDPA SECDLVIEAV VEKMSIKADI FSALDRLAPG HAILASNTSS
LPITGIAAHT GRPEKVIGMH FMNPVPVMKL VEVINGLATT PEVTATVRAV AEAMGKIPVE
CRDVPGFVSN RVLMVMINEA LWELYEGVAT AEGIDQIMKL GMNHPMGPLA LADLIGLDTV
LAILGVLQDG YGDPKYRPSP LLKSYVAAGW LGRKTGRGIY EYK