Gene Dole_0248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_0248 
Symbol 
ID5693066 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp281606 
End bp283453 
Gene Length1848 bp 
Protein Length615 aa 
Translation table11 
GC content44% 
IMG OID641262828 
Producthypothetical protein 
Protein accessionYP_001528135 
Protein GI158520265 
COG category[S] Function unknown 
COG ID[COG1479] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAAT TCATTTACAC GGTTGAAGAA ATATTCGATT CTTCCACCAT GAAAGGCTGT 
CTTACACAAC ATGGGTGTAG CGCCTTCAGG ATTCCATCAT ACCAGCGGGG GTATAAGTGG
GGGTCTGAAA CCAACCAGCC GGTTGAACGC CTGCTGAGCG ATTTGATAAA AGCCTGGAAG
GCCGGCGCAA AAGAATATCT CCTGCAAGCG ATAACTGTGA AAAAAAACTC ATCCGGTAAT
AAAAATTATT TTTTGGAAGT TATTGATGGC CAACAACGCT TGACCACGCT TTTTATCCTT
CTCTATGTGC TGGAACGACA GATCGAGCCG GAAGTTTTCG GAAAAACTAT TGCGGCAGAC
AAACTCCTCT ATAGTATACG CCACGAACAA CAGAGTTTGG ATGATCTGAT TAAAAATTGT
GTTGACACCA CAAAAGAGAA GGCCATCCCA TTCGAAGAAC TTAAAGAAAA ACAGAGGGTT
GAAGAAGAAA CCCAGCAGGA TGTTTACTAT CTTAAATGTG CATTTTTTCG CTGTGTTTGC
GAGTTAGATT CCATTTCAGT GGAAAACAAT GGCGGCCATG ACAAGCTGAA TGGTCTCAAA
AATTTTGTAC TTACAAAAAC AAAACTGCTG GTAAACGCAG TAGAACCTCA CATCAGGGGC
GAGGATATTT TCTGCAATCT AAATTCCAAC AGAGTCTTTC TAACCGAGAC CGAACTCATC
AAGGGGCTTT TGCTCACAAG GGTCGCACGC GAATCAGCTA CGGCTCGTCC ACGACAATAC
CGGGAAATTT TGGAAAAGCG TATTCATCTT GGCCGGAAGT GGGACGAAAT TTCTCGATGG
GCCAATCAGC CCAATATTCG TTCACTCTAT TTCACAGCAT TCAAAAACAG CGGAGATGAC
CACATGCATG ACATCCTGGA ACTGGTGGCT TTGCAAATGA AGAACTCGTA TGAGCAAACC
AGTAAAGGCA GCGTGGCCGA GAATCCGCTA TTCGAATATT TTCTCGAACA AGGTGAACAA
GGTAGATGGG AACCCATATT TTTATTGCTC AACAATACGT ATGCGACTCT TGATGAATGG
TATGAATGTA CTGAGGATTA TCATCTACTG GGGTACTGCC TTGTTGAAAA AAACGAAACC
GAACAGAAAG TTTTGCTCAA GGATCTTCTT GGGAAATCAA CAAAGGTCGA GGTAAGAAAG
TGCCTTCTGG AGCAGCGAAA TGAGATTATA AAATCTGATT CTGAAAAACA AATTTTGGCA
TACGGTGAAG ACAATCAGCG GATCAAGTCT ATTCTGCTGG CCTTGAGCGT GTTTAGAGGA
CGGGAGATTG GGGGGCGGTT TGATTTCTTT GCCTATCAGC ACGAAGACTG GTCTTTGGAA
CATATATTCC CGCAAACCCC TTTTGGCAAG GAGGCAAAGC TCACACATGA GCAGGAAAAA
ACGGCTTTTG ATGTTCTGAT CAATAACGAA GGAAATATTC TTTCAGAGGA AGAGCGCAAA
AATATCGAGA TTGCACGCGC TTCTCAGGAA AATGCCGAGA CAATGATGGC CAAGGTTAAT
GAAATTCTAA TAAAAGTGCC TCTTCTACAT CAACTTGGCA ATCTCTGCCT GCTTAGCCGC
AAAGATAACA CAGCAATGGG GTGTCTAATG TTTGATGATA AGCGGAAGGT GATTCGCGAC
CGGATTGCCC GGGGAAGTTT TGTCCCCAGT CACACATACG AGGTGTTCAG CAAAATGATT
GTCGGGAAAG ACACCAGTTT ACAAGTATGG TCAAAATCGG ATATCGAGTC CCATCAAAAA
GAGATCGTCA AACGTGTGAA AGAACTGATA GAGGAGAAGA GTTCATGA
 
Protein sequence
MSEFIYTVEE IFDSSTMKGC LTQHGCSAFR IPSYQRGYKW GSETNQPVER LLSDLIKAWK 
AGAKEYLLQA ITVKKNSSGN KNYFLEVIDG QQRLTTLFIL LYVLERQIEP EVFGKTIAAD
KLLYSIRHEQ QSLDDLIKNC VDTTKEKAIP FEELKEKQRV EEETQQDVYY LKCAFFRCVC
ELDSISVENN GGHDKLNGLK NFVLTKTKLL VNAVEPHIRG EDIFCNLNSN RVFLTETELI
KGLLLTRVAR ESATARPRQY REILEKRIHL GRKWDEISRW ANQPNIRSLY FTAFKNSGDD
HMHDILELVA LQMKNSYEQT SKGSVAENPL FEYFLEQGEQ GRWEPIFLLL NNTYATLDEW
YECTEDYHLL GYCLVEKNET EQKVLLKDLL GKSTKVEVRK CLLEQRNEII KSDSEKQILA
YGEDNQRIKS ILLALSVFRG REIGGRFDFF AYQHEDWSLE HIFPQTPFGK EAKLTHEQEK
TAFDVLINNE GNILSEEERK NIEIARASQE NAETMMAKVN EILIKVPLLH QLGNLCLLSR
KDNTAMGCLM FDDKRKVIRD RIARGSFVPS HTYEVFSKMI VGKDTSLQVW SKSDIESHQK
EIVKRVKELI EEKSS