Gene Dole_0246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_0246 
Symbol 
ID5693064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp277119 
End bp279092 
Gene Length1974 bp 
Protein Length657 aa 
Translation table11 
GC content56% 
IMG OID641262826 
Producthypothetical protein 
Protein accessionYP_001528133 
Protein GI158520263 
COG category[S] Function unknown 
COG ID[COG3472] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATCT CCACAATTCT CGACCACATC GACAGCGGCC ACATGGCACT GCCGGAGTTC 
CAGCGTGGGT ATGTCTGGAA TCGCGACCAG GTGCGTGCCT TGTTCGATTC TCTTTACCGT
CGTCATCCGG TGGGTGGCTT GCTGGTTTGG GCCACCGAAT CCAGGTCCGC GACCCATCGT
GGCGACGGGC CACTGGCGGC TGGTGTTGTC AAGCTGCTGC TGGACGGCCA GCAACGGATG
ACCACCCTGT ACGGCGTGGC GAGAGGTAAG CCACCGAAGT TTTTTGACGG CAATTTGCAA
GTTTTCACCG GCCTGCGGTT TCATCTGGAA TCAGAAATCT TTGAATTCTA TCAGCCGGTT
AAGATGAAGG ATGATTCGCT TTGGATCGAT GTGACCGGGT TGATGAAAAA CGGCTCCGCC
GGATTGGGTA AATTCATTGC CACGCTCAGC ACCAATCCTG AGCTGGCTCC CAAAATCGGT
GACTTTGCCG GCCGGCTAAG TCAACTGCTG GGGATTCTGG AAATCGAATT GCATGCCGAG
GAGGTGACCG GTGCGGACAA GCCGCTGGAT GTGGTGGTGG ATATTTTCAA CCGCGTCAAC
AGCGGTGGCA CCAAGCTTTC CAAAGGGGAC CTGGCCCTGG CCAAAATCTG CGCCGAGTGG
CCTGCGGGCC GCGATGTGAT GCGGGCTACG CTCAAAAAAT GGGCTGACGC GGATTATAAC
TTCAACCTCG ACTGGTTGCT GCGTTCGGTT AACACCGTGC TGACCGGCGA GGCGAAGTTC
CTTTATCTGC ATGAGAAGAG CGCGGATGAG ATCAAGGATG CGCTGAGCCG GGCCACCAGG
CATATTGATA CCTGCCTCAA CTTAATCAGT GGCCGGCTCG GGCTGGATCA TGACCAGGTG
TTCTTCGGCC GGTTCGGCGT GCCGGTGATG GCCCGTTATC TTGACCAGCG CGAGTGCAAC
AAGCTCGGCT CAATGAATGA GAAGGAACGC GACAAGCTCC TCTTTTGGTT TGCCCAGGCC
GCAATGTGGG GGCGTTTTTC CGGTTCAACA GAGTCTTTCA TCGACAAGGA TCTTGAGGCG
ATTGCCGACG GTGACGGCAA TCTCGATCCG CTTCTTGAAC AATTGCGCCT CTGGAACGGG
GGGCTGCGGG TCGAGGCCGG GCATTTCACC GGCTGGAGCC TGGGCGCACG TTTTTACCCG
GTGCTTTACC TGTTGACCCG TATGGGGGGA TCCCGGGACT GGGGCACCGG CCTGCCGCTC
AAAGCAAATT TGCTTGGAAA AATGAACCGG CTGGAAGTGC ATCACATCTT CCCAAAGGCC
AGACTTTACA AAGCCAAAGC CCTCGACTTC CGAAAGCCGG AGGTGAACGC ACTGGCCAAC
TTCTGTTTTT TAACCAAAGA CAGCAACCTG AAAATAAGCG ACCGGCTGCC GGAGGAGTAT
TTCCCCGAGA TAGAAGCGGC TCACCCCGGT GCGCTGGCCT CGCAATGGAT TCCCGATGAC
CCTGTACTGT GGACGCTGGA TCGGTACCGG GACTTTCTGG TGGCTCGTCA AAAACTGTTA
GCCGCTGAAC TGAATCACCA GATGGAGACG TTGCTTCACG GAGATACACA ATGGCTTTCC
AGTGGCGTCT CTCCGAAGCT GGAACCTGCC ATAGTAGTGG GGGGAATCAG CAGCGAAAAT
GAAGAGGCCG AACTGGACAA ACTTAATGCC TGGATAGAAT CACTTGGGCT GCCTTCCGGC
GTGATGTCAT ACGACTATGC CGATGCCCAG TCCGGCCGGC AGATCGCGGT GTTTGATCTG
GCCTGGCCCC TGGGACTGCA AGAGGAATTG AGTCAGCCGG TGGCTGTCTT ACTTAATGAG
GAGCCCGCCA CCATCGCCCT GGCCAGTCAG GCCGGTTTTC GTTGTTTTAC CGATGGTCAG
GCATTCCGCA AATATGTTGA ACGTGAAATG ATGGCGGGAG ATGCCCATGC CTGA
 
Protein sequence
MKISTILDHI DSGHMALPEF QRGYVWNRDQ VRALFDSLYR RHPVGGLLVW ATESRSATHR 
GDGPLAAGVV KLLLDGQQRM TTLYGVARGK PPKFFDGNLQ VFTGLRFHLE SEIFEFYQPV
KMKDDSLWID VTGLMKNGSA GLGKFIATLS TNPELAPKIG DFAGRLSQLL GILEIELHAE
EVTGADKPLD VVVDIFNRVN SGGTKLSKGD LALAKICAEW PAGRDVMRAT LKKWADADYN
FNLDWLLRSV NTVLTGEAKF LYLHEKSADE IKDALSRATR HIDTCLNLIS GRLGLDHDQV
FFGRFGVPVM ARYLDQRECN KLGSMNEKER DKLLFWFAQA AMWGRFSGST ESFIDKDLEA
IADGDGNLDP LLEQLRLWNG GLRVEAGHFT GWSLGARFYP VLYLLTRMGG SRDWGTGLPL
KANLLGKMNR LEVHHIFPKA RLYKAKALDF RKPEVNALAN FCFLTKDSNL KISDRLPEEY
FPEIEAAHPG ALASQWIPDD PVLWTLDRYR DFLVARQKLL AAELNHQMET LLHGDTQWLS
SGVSPKLEPA IVVGGISSEN EEAELDKLNA WIESLGLPSG VMSYDYADAQ SGRQIAVFDL
AWPLGLQEEL SQPVAVLLNE EPATIALASQ AGFRCFTDGQ AFRKYVEREM MAGDAHA