Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_0246 |
Symbol | |
ID | 5693064 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 277119 |
End bp | 279092 |
Gene Length | 1974 bp |
Protein Length | 657 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641262826 |
Product | hypothetical protein |
Protein accession | YP_001528133 |
Protein GI | 158520263 |
COG category | [S] Function unknown |
COG ID | [COG3472] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAATCT CCACAATTCT CGACCACATC GACAGCGGCC ACATGGCACT GCCGGAGTTC CAGCGTGGGT ATGTCTGGAA TCGCGACCAG GTGCGTGCCT TGTTCGATTC TCTTTACCGT CGTCATCCGG TGGGTGGCTT GCTGGTTTGG GCCACCGAAT CCAGGTCCGC GACCCATCGT GGCGACGGGC CACTGGCGGC TGGTGTTGTC AAGCTGCTGC TGGACGGCCA GCAACGGATG ACCACCCTGT ACGGCGTGGC GAGAGGTAAG CCACCGAAGT TTTTTGACGG CAATTTGCAA GTTTTCACCG GCCTGCGGTT TCATCTGGAA TCAGAAATCT TTGAATTCTA TCAGCCGGTT AAGATGAAGG ATGATTCGCT TTGGATCGAT GTGACCGGGT TGATGAAAAA CGGCTCCGCC GGATTGGGTA AATTCATTGC CACGCTCAGC ACCAATCCTG AGCTGGCTCC CAAAATCGGT GACTTTGCCG GCCGGCTAAG TCAACTGCTG GGGATTCTGG AAATCGAATT GCATGCCGAG GAGGTGACCG GTGCGGACAA GCCGCTGGAT GTGGTGGTGG ATATTTTCAA CCGCGTCAAC AGCGGTGGCA CCAAGCTTTC CAAAGGGGAC CTGGCCCTGG CCAAAATCTG CGCCGAGTGG CCTGCGGGCC GCGATGTGAT GCGGGCTACG CTCAAAAAAT GGGCTGACGC GGATTATAAC TTCAACCTCG ACTGGTTGCT GCGTTCGGTT AACACCGTGC TGACCGGCGA GGCGAAGTTC CTTTATCTGC ATGAGAAGAG CGCGGATGAG ATCAAGGATG CGCTGAGCCG GGCCACCAGG CATATTGATA CCTGCCTCAA CTTAATCAGT GGCCGGCTCG GGCTGGATCA TGACCAGGTG TTCTTCGGCC GGTTCGGCGT GCCGGTGATG GCCCGTTATC TTGACCAGCG CGAGTGCAAC AAGCTCGGCT CAATGAATGA GAAGGAACGC GACAAGCTCC TCTTTTGGTT TGCCCAGGCC GCAATGTGGG GGCGTTTTTC CGGTTCAACA GAGTCTTTCA TCGACAAGGA TCTTGAGGCG ATTGCCGACG GTGACGGCAA TCTCGATCCG CTTCTTGAAC AATTGCGCCT CTGGAACGGG GGGCTGCGGG TCGAGGCCGG GCATTTCACC GGCTGGAGCC TGGGCGCACG TTTTTACCCG GTGCTTTACC TGTTGACCCG TATGGGGGGA TCCCGGGACT GGGGCACCGG CCTGCCGCTC AAAGCAAATT TGCTTGGAAA AATGAACCGG CTGGAAGTGC ATCACATCTT CCCAAAGGCC AGACTTTACA AAGCCAAAGC CCTCGACTTC CGAAAGCCGG AGGTGAACGC ACTGGCCAAC TTCTGTTTTT TAACCAAAGA CAGCAACCTG AAAATAAGCG ACCGGCTGCC GGAGGAGTAT TTCCCCGAGA TAGAAGCGGC TCACCCCGGT GCGCTGGCCT CGCAATGGAT TCCCGATGAC CCTGTACTGT GGACGCTGGA TCGGTACCGG GACTTTCTGG TGGCTCGTCA AAAACTGTTA GCCGCTGAAC TGAATCACCA GATGGAGACG TTGCTTCACG GAGATACACA ATGGCTTTCC AGTGGCGTCT CTCCGAAGCT GGAACCTGCC ATAGTAGTGG GGGGAATCAG CAGCGAAAAT GAAGAGGCCG AACTGGACAA ACTTAATGCC TGGATAGAAT CACTTGGGCT GCCTTCCGGC GTGATGTCAT ACGACTATGC CGATGCCCAG TCCGGCCGGC AGATCGCGGT GTTTGATCTG GCCTGGCCCC TGGGACTGCA AGAGGAATTG AGTCAGCCGG TGGCTGTCTT ACTTAATGAG GAGCCCGCCA CCATCGCCCT GGCCAGTCAG GCCGGTTTTC GTTGTTTTAC CGATGGTCAG GCATTCCGCA AATATGTTGA ACGTGAAATG ATGGCGGGAG ATGCCCATGC CTGA
|
Protein sequence | MKISTILDHI DSGHMALPEF QRGYVWNRDQ VRALFDSLYR RHPVGGLLVW ATESRSATHR GDGPLAAGVV KLLLDGQQRM TTLYGVARGK PPKFFDGNLQ VFTGLRFHLE SEIFEFYQPV KMKDDSLWID VTGLMKNGSA GLGKFIATLS TNPELAPKIG DFAGRLSQLL GILEIELHAE EVTGADKPLD VVVDIFNRVN SGGTKLSKGD LALAKICAEW PAGRDVMRAT LKKWADADYN FNLDWLLRSV NTVLTGEAKF LYLHEKSADE IKDALSRATR HIDTCLNLIS GRLGLDHDQV FFGRFGVPVM ARYLDQRECN KLGSMNEKER DKLLFWFAQA AMWGRFSGST ESFIDKDLEA IADGDGNLDP LLEQLRLWNG GLRVEAGHFT GWSLGARFYP VLYLLTRMGG SRDWGTGLPL KANLLGKMNR LEVHHIFPKA RLYKAKALDF RKPEVNALAN FCFLTKDSNL KISDRLPEEY FPEIEAAHPG ALASQWIPDD PVLWTLDRYR DFLVARQKLL AAELNHQMET LLHGDTQWLS SGVSPKLEPA IVVGGISSEN EEAELDKLNA WIESLGLPSG VMSYDYADAQ SGRQIAVFDL AWPLGLQEEL SQPVAVLLNE EPATIALASQ AGFRCFTDGQ AFRKYVEREM MAGDAHA
|
| |