| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0240 |
|---|
| Symbol | |
|---|
| ID | 5693058 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | + |
|---|
| Start bp | 266668 |
|---|
| End bp | 268929 |
|---|
| Gene Length | 2262 bp |
|---|
| Protein Length | 753 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641262820 |
|---|
| Product | ATPase central domain-containing protein |
|---|
| Protein accession | YP_001528127 |
|---|
| Protein GI | 158520257 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0464] ATPases of the AAA+ class |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAATAC CAAAACAGTT TCGACGCAAG CGGAGTATGA ATATGGGGAT GAACCAAGCC
TTTTTTTTCT CTCGCCCCCA GGTAGAGGAC AAAAACGGAC GTTTTGTTGT CAGAAAATGC
TGTGACTATA TGCTGCGGCT GATGGGAAAA CGATTCTCTT TAGATGCAGA GACCGTGGAG
TTCATTTGCT GGCTGGTCGG TGAACAGCGA AGGGAAATCA GGAAATTCAT CCTGACCCGG
CTTCCGGAGG ATGAGCAGGA ATATTTTGAT GAATTCCTCT CCCCGGATAC TCATGATGAC
GGGATGTTTG GTATAACCAT TGTGCAAACG CTGCAAATCT CAAAAGACCG AAGCATCGCC
GCCGACTGCT TTCAATTTTT CAGCCAGATT TTGCAGCGCC GGCGAAAAGC ACTGGCCGGC
AACGGTAATT CCGGCCTGCA AAAAAGCTTT GATCAACTCC AGTCCATCTT CCGCCTCACA
GACCTGGAGA CGGAGCTGTG CCTTTTTCTC TTTATAATCA GCGCTTACGA TACGCCGGAG
AAATTTTTCG ACGACCATCT GCACACAGAC AGGTTTCAGG GGCGTGGTTT TCTCTGCACC
GCGCTGAACG CATCCAAACA TGAAATTAAC CAGGCGATTG GCAAGACGCT GACGGCTGCC
GGGCTGGTGG AAATTTCCGG AGGCTTTAAA AGCACCATCC GCTTGACAGA TGAAGTACAA
AACATCCTTT TTGATCCTGC CTGCGACATA CTTCAGAAAA CCAATTTAAA AGACGCTAAA
AAACAACCGG CGCTTCCCCT GTCTTACCAT TTTGTGCCGG AAGCCGATAT CAGCCATATT
CTTTCTCTGC TCTGCGGAAA AACCGATACC GCCACTCACA TCCTCCTGTA TGGCCCGCCA
GGTACCGGCA AAACAAGCTT TGCGTATGGC CTTTCCCGCA AGCTGAATGA TCCGGTATAT
GAAATCACGC ATGACAACTC CCAGGAGAAT GACAGCAAAA GCCGACGCCT CTCCCTGACG
GTCTCAATCA ACAGCATGAA CCGGGGCCAG GGCGCGATTT TTATCGTTGA TGAGGCAGAT
AATCTGCTGA ACACGGAACG CCACTGGATG ATAAGCGGTG AAGTGCAGGA CAAGGGCTGG
CTCAATAAGC TGATGGACAA GCCGGGGCTG CGGATCATCT GGATTGTCAA CGCCATCCAT
TCCATAGAAC CGTCTGTAGC GCGCCGCTTT GCCTACAGCC GCCATTTTGA GCCGTTTACC
TGCAAACAGC GGGAACAGCT CTGGGATAAT GTGATCCGGA AAAATCGCTG CAAGCGTTTT
TTTACCACCG AAGACCTGCG GCAACTGGCC CGGGAGTTTG ATGCCAGCGC CGGTGTCATT
GACATGGCCG TAAAAAAAGC AAAAGAAGCC GGCCATGCCG GCCGGGCTCC AATGCTTCAG
GCGGTCCGGC AGGGGATTGA AGCCCACCAG GCCCTGGTCA ATGGCGGCCA TAAAAAACCC
CCCAAAGAAG CAATCGATCA CCGGTATTCT CTGGATGGGT TAAACATATC CGCCGACATT
CGGCAGGTAA TGTTCCAGGC GGAACAATTC AGCCGGCACC TTAAAAATAC CACCAATATG
ACCCACTATA ATTTCAACCT GCTCCTTCAT GGACCACCGG GCTCGGGCAA AAGCGAATTT
GCCCGCTACC TTGCGCAACA CCTGGACCGG GAACTTCATG TTCGCCGCTC CAGCGACATC
TTGAGCCCAT ATGTAGGTGT GGCCGAAAAA AATATCCGCC AGTCATTTGA CCAGGCCGCT
CACCAGGGCG CTATCCTTTT AATTGACGAA GCCGACGCCC TGCTGTTTCC CCGGGCAAAT
GCCAGCCGCT CCTGGGAAAT CAGCCACACG GCCGAACTGC TCACCGCCAT GGAGCGGTTT
CGCGGCCTGC TTATCTGCAC CACCAACCGG CTGAACGGAA TAGATTCTGC CGCCATCCGG
CGATTTAACC ATAAAATCAG ATTCGACTTT CTCACGCCGG ACGGCAGCTG GATCTTTTAC
AACAAAATGC TGACACCCCT GGCAAAACTC GCGCCGGATG ACCGGAACAT CAAGACCGTC
AAAAACCTGC GCCGCCTGAC CCCCGGTGAT TTTAAGATCG TCCGGGACCG CTTTGCCTTT
TATCCGAAAG AAGAGATCAC CCATACCATG CTGGTTGACG CCCTGGGGCA GGAAGCCACC
GTCAAACAGC AGCAAACAGG AGAAAAGCCG ATTGGCTTTT AA
|
|---|
| Protein sequence | MAIPKQFRRK RSMNMGMNQA FFFSRPQVED KNGRFVVRKC CDYMLRLMGK RFSLDAETVE
FICWLVGEQR REIRKFILTR LPEDEQEYFD EFLSPDTHDD GMFGITIVQT LQISKDRSIA
ADCFQFFSQI LQRRRKALAG NGNSGLQKSF DQLQSIFRLT DLETELCLFL FIISAYDTPE
KFFDDHLHTD RFQGRGFLCT ALNASKHEIN QAIGKTLTAA GLVEISGGFK STIRLTDEVQ
NILFDPACDI LQKTNLKDAK KQPALPLSYH FVPEADISHI LSLLCGKTDT ATHILLYGPP
GTGKTSFAYG LSRKLNDPVY EITHDNSQEN DSKSRRLSLT VSINSMNRGQ GAIFIVDEAD
NLLNTERHWM ISGEVQDKGW LNKLMDKPGL RIIWIVNAIH SIEPSVARRF AYSRHFEPFT
CKQREQLWDN VIRKNRCKRF FTTEDLRQLA REFDASAGVI DMAVKKAKEA GHAGRAPMLQ
AVRQGIEAHQ ALVNGGHKKP PKEAIDHRYS LDGLNISADI RQVMFQAEQF SRHLKNTTNM
THYNFNLLLH GPPGSGKSEF ARYLAQHLDR ELHVRRSSDI LSPYVGVAEK NIRQSFDQAA
HQGAILLIDE ADALLFPRAN ASRSWEISHT AELLTAMERF RGLLICTTNR LNGIDSAAIR
RFNHKIRFDF LTPDGSWIFY NKMLTPLAKL APDDRNIKTV KNLRRLTPGD FKIVRDRFAF
YPKEEITHTM LVDALGQEAT VKQQQTGEKP IGF
|
|---|
| |