Gene Dole_0228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_0228 
Symbol 
ID5693045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand+ 
Start bp251955 
End bp252572 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content49% 
IMG OID641262807 
ProductTetR family transcriptional regulator 
Protein accessionYP_001528115 
Protein GI158520245 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.728602 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCGG AAAAACGAAA AGACCTGATC CTGGCATGTT CGAAAAAACT GTTTGCAAAA 
CAGGGGTTTT ACAGGACACA AATTTCAGAC ATCATAGATG AAGCCAGGAT TGCCAGGGGG 
ACGATATACC AGTATTTTAA AAACAAAGAA GATATTTTTG TTTCCCTGCT GGAAGGCGCC 
TATGCCCAGT GGGAGCAGGC CGTTTCCCAG GCCGTGGCCG CCATTGACCT GAAAACCATC 
AAACCGGTGG ATTACTTTCG GCTGCGCATA CAAACAACAC TGGAGTTTTT ATTAGCTGAT 
CCGGATATTT GCAGCATTGT CCTCTCCATG GGATTCGGTC TTCCCGAAGA CCTGGAAAAA 
GCAACCCGCA AGCTTGAAAG CAAAATACGG GATATTGCGG TAAACGACTT CATGCTGGGC 
ATTCACAACA ATCATGTTCG AAAAAACATC AACATCGATC ATGCCGCCGA GATGATTGCC 
GGGGCCGCGT TCCGGTCGGC CTATTATATG CAGAAAAAGG CCAAAACCGG TGACCGGGCC 
GACATCGACA CCATGACCGA CGAAATCGTC AACCTGCTGG CGCCCGGCAT CTTTCTTCCT 
GAATCCCTGA AACTGTGA
 
Protein sequence
MKAEKRKDLI LACSKKLFAK QGFYRTQISD IIDEARIARG TIYQYFKNKE DIFVSLLEGA 
YAQWEQAVSQ AVAAIDLKTI KPVDYFRLRI QTTLEFLLAD PDICSIVLSM GFGLPEDLEK 
ATRKLESKIR DIAVNDFMLG IHNNHVRKNI NIDHAAEMIA GAAFRSAYYM QKKAKTGDRA 
DIDTMTDEIV NLLAPGIFLP ESLKL