Gene Dole_0186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_0186 
Symbol 
ID5693003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp204860 
End bp205612 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content53% 
IMG OID641262765 
ProductMerR family transcriptional regulator 
Protein accessionYP_001528073 
Protein GI158520203 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0070729 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGAGAA AACCCAAGAC AGTAAAGGCT TCTCCCCCGC CCAGGGTCAT GAAGATGAAG 
GAGCTGTCCG AAGCCACGGG CGTAAACAGC GCCACGATCC GCTACTACAT CAACCAGGGC
CTGCTGCCCC AGCCGCACAA AACCCACAAG AACATGGCCT ACTATGACGA GCGCTATATC
GCCCTGGTCA ACCTGGTTAA AAAACTTCAG AAAGAGTATT TTCTGCCCCT GGACGTGATC
AAGCAGGCCA TTGAAGAGGT GGGCCACGAA CGCGCGCCCT ACATGATTCA GGAGATCGTG
GAAAAACTGG TCCAGGAAAA AGAGGGTACC TGGTCCGAGG TGGCCCCCCC CAATCACGAG
GCCGGCATGA CCCGGGCGGA ACTGGTCGCC GCATCCGGCC TGAGTACTGA AGACTTTGAC
GCGGCCGTGG AGGCCGGCTT TCTTTTAAAA GACGGAAACG ACCGGTTTGA CCGGGAAAAC
ATTCAGGTAG CCATGCTGCT GGCCCAGATA CGGAGCCATC TCACCAGGGA AAAAGGGTTT
TCAACCGAAT TTTTCATCAT GCACTTCAAA ACCCTGGAAA CCCTGGTCAA CAAGGAGCTC
TCCCTCTTCA TGAACAACAT ACAAAGCGGC AACCTCTCCA TTGAGGAGGT CAACCAGTAT
GCCAACCGCT CCTTTGACCT GTTTCACAAA ATCTCCCCCA TTCTTCACAA ACGGCTGATC
AGCAAAAAAA TAAAAGACTC CCTGAACCTG TAA
 
Protein sequence
MPRKPKTVKA SPPPRVMKMK ELSEATGVNS ATIRYYINQG LLPQPHKTHK NMAYYDERYI 
ALVNLVKKLQ KEYFLPLDVI KQAIEEVGHE RAPYMIQEIV EKLVQEKEGT WSEVAPPNHE
AGMTRAELVA ASGLSTEDFD AAVEAGFLLK DGNDRFDREN IQVAMLLAQI RSHLTREKGF
STEFFIMHFK TLETLVNKEL SLFMNNIQSG NLSIEEVNQY ANRSFDLFHK ISPILHKRLI
SKKIKDSLNL