Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_0186 |
Symbol | |
ID | 5693003 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 204860 |
End bp | 205612 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641262765 |
Product | MerR family transcriptional regulator |
Protein accession | YP_001528073 |
Protein GI | 158520203 |
COG category | [K] Transcription |
COG ID | [COG0789] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0070729 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGAGAA AACCCAAGAC AGTAAAGGCT TCTCCCCCGC CCAGGGTCAT GAAGATGAAG GAGCTGTCCG AAGCCACGGG CGTAAACAGC GCCACGATCC GCTACTACAT CAACCAGGGC CTGCTGCCCC AGCCGCACAA AACCCACAAG AACATGGCCT ACTATGACGA GCGCTATATC GCCCTGGTCA ACCTGGTTAA AAAACTTCAG AAAGAGTATT TTCTGCCCCT GGACGTGATC AAGCAGGCCA TTGAAGAGGT GGGCCACGAA CGCGCGCCCT ACATGATTCA GGAGATCGTG GAAAAACTGG TCCAGGAAAA AGAGGGTACC TGGTCCGAGG TGGCCCCCCC CAATCACGAG GCCGGCATGA CCCGGGCGGA ACTGGTCGCC GCATCCGGCC TGAGTACTGA AGACTTTGAC GCGGCCGTGG AGGCCGGCTT TCTTTTAAAA GACGGAAACG ACCGGTTTGA CCGGGAAAAC ATTCAGGTAG CCATGCTGCT GGCCCAGATA CGGAGCCATC TCACCAGGGA AAAAGGGTTT TCAACCGAAT TTTTCATCAT GCACTTCAAA ACCCTGGAAA CCCTGGTCAA CAAGGAGCTC TCCCTCTTCA TGAACAACAT ACAAAGCGGC AACCTCTCCA TTGAGGAGGT CAACCAGTAT GCCAACCGCT CCTTTGACCT GTTTCACAAA ATCTCCCCCA TTCTTCACAA ACGGCTGATC AGCAAAAAAA TAAAAGACTC CCTGAACCTG TAA
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Protein sequence | MPRKPKTVKA SPPPRVMKMK ELSEATGVNS ATIRYYINQG LLPQPHKTHK NMAYYDERYI ALVNLVKKLQ KEYFLPLDVI KQAIEEVGHE RAPYMIQEIV EKLVQEKEGT WSEVAPPNHE AGMTRAELVA ASGLSTEDFD AAVEAGFLLK DGNDRFDREN IQVAMLLAQI RSHLTREKGF STEFFIMHFK TLETLVNKEL SLFMNNIQSG NLSIEEVNQY ANRSFDLFHK ISPILHKRLI SKKIKDSLNL
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