| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0171 |
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| Symbol | |
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| ID | 5692988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 189575 |
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| End bp | 191494 |
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| Gene Length | 1920 bp |
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| Protein Length | 639 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641262750 |
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| Product | ABC transporter-related protein |
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| Protein accession | YP_001528058 |
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| Protein GI | 158520188 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTCTCA TCAGTATGCA GGATGTCCGC TGGGGTTTCG GCGAACCGTA CCTTCTGGAC
GGCATCAGCT TTAATATTGA AAAAGGGGAA CGGGTCGGGC TTTTGGGGCG CAACGGCGTT
GGAAAGTCGA GCCTGTTCCG GTTGCTGACC CGGGAAATCC TGCCGGACAG CGGGGAAATC
GTCATCGGCC AGGGGATTCA GGTGGCCGCC CTGGAGCAGG AGGTTGCAGC GGGGAGACCG
TGTCCTTCCA AAATGTCCCC GGAAGTCAAA GAAACCGTTT TTGAAGTGGT GGCCCGCGGC
CTGGGCCCTG CCGGACAAAA CCTGGCCGAC TTTTACCGGG TGTGTTCCGC CATGGCGTCC
TCACATGAAC CGCGCCTTTC CGACGAACGG GAGCGTTTAC AGCATGCGCT GGACACCGGG
GGCGGATGGG TGCTGCAACA ACAGATCGAA AACATTCTTT CGCGGACCGA TCTTGATCCC
AAAAGGCCTT TTGCCGATCT GTCGGCGGGC ATGAAACGGC GGGCCCTGTT TGCCCGGTCC
CTGGCCCTGT CGCCCGACCT TCTGCTGCTG GATGAACCGA CCAACCACAT GGATATCGAC
AGCATTGTCT GGATGGAATC GTTTCTCCTG CGCCATGTCA AAACCCTTCT GTTTATTACC
CATGACCGTG TTTTTTTAGA ACGGATCGCC ACCCGGATTA TGGTCCTGGA CCGTGGCCGG
CTGTTTTCCT ATGCCTGCGA CTACAAGACC TACCTGCAGC GCCGCGAGGC GGAGCTGGCG
GCAGAAGCCG AGCACCAGCG CAATTTCGAC AAAAAACTCT CAAAGGAGGA GGCCTGGATC
CGGCAGGGCA TCAAGGCCCG GCGCACCCGC AACGAAGGCC GGGTGCGCGC GTTACAGGAG
ATGCGGGCCA AAGTTCGCCA GCGCCGCGCC AAAACAGGCC AGGTGCGCCT GGCGCTGCAG
GAGGCCGAAC GCACCGGCAA GCTGGTGGTC CAGGCGGAGG GACTGACGTA TGCCTACGAC
CAGACGCCCA TTGTGCAAAA TTTTTCCACC ACCATCCTGC GCGGTGACAA GGTCGGCATT
ATCGGCCCCA ACGGCGTGGG CAAAACCACA CTGATCCGGC TGCTGCTGGG CGCCCTTGCA
CCGGACAGCG GCACGGTCCG CCACGGCACA CACCTGGAGC CGGCCTATTT CGACCAGCTC
CGGACCCAAC TGGATGAGCA GAAAACGGTT GTGCAGAACA TTTCCATGGA CAATGATTTT
ATCGTGTTTA ACGGCCAGAA GCGGCACGTG ATCGGTTATC TCCAGGATTT TCTGTTTTCG
CCCGAGCGGT GCCGCACCCC GGTTCACGTA CTTTCCGGCG GAGAGCGCAA CCGGCTGCTG
CTGGCCAAAC TCTTTATCCG CCCGGCCAAT CTGCTGGTGT TAGACGAGCC GACCAATGAC
CTGGATGCCG AGACCCTGGA ATTATTAGAA GAACTGTTGT TTTCCTATGA CGGCACCCTG
CTGCTGGTCA GCCATGACCG AAGCTTTTTA AACCATATCG TGACCAGCAC GCTGGTTTTT
GAAGGCAACG GGCAAGTGGT TGAATATGCC GGCGGATACG ATGACTGGCT GGCCCAGCGC
CCCCAACCGG TCGCCCCGGA AGCGGCCGTG CCAAAACAGG CGCAACCCCC CAGGCAGGCC
CCCCCGGCCA AACCCAAAAA GCTGACCTTT GCCCAGAACC GGGAGCTTAA AGAGCTGCCG
GCCATGATCG AAGCCCTGGA AACCGAACAG CGCCTTCTCC AGGCCGCCAT GGCTGACCCT
GCTTTCTACA GGCAGGCAAA AGAAGAGATC AAGGCCCGGC AAAAACGCCT TCAGGAAGTC
GAAGACAAAA TCAGCGCCTG TTACCGCCGC TGGGAAGAAC TGGAAGATCT AACGCCATAG
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| Protein sequence | MALISMQDVR WGFGEPYLLD GISFNIEKGE RVGLLGRNGV GKSSLFRLLT REILPDSGEI
VIGQGIQVAA LEQEVAAGRP CPSKMSPEVK ETVFEVVARG LGPAGQNLAD FYRVCSAMAS
SHEPRLSDER ERLQHALDTG GGWVLQQQIE NILSRTDLDP KRPFADLSAG MKRRALFARS
LALSPDLLLL DEPTNHMDID SIVWMESFLL RHVKTLLFIT HDRVFLERIA TRIMVLDRGR
LFSYACDYKT YLQRREAELA AEAEHQRNFD KKLSKEEAWI RQGIKARRTR NEGRVRALQE
MRAKVRQRRA KTGQVRLALQ EAERTGKLVV QAEGLTYAYD QTPIVQNFST TILRGDKVGI
IGPNGVGKTT LIRLLLGALA PDSGTVRHGT HLEPAYFDQL RTQLDEQKTV VQNISMDNDF
IVFNGQKRHV IGYLQDFLFS PERCRTPVHV LSGGERNRLL LAKLFIRPAN LLVLDEPTND
LDAETLELLE ELLFSYDGTL LLVSHDRSFL NHIVTSTLVF EGNGQVVEYA GGYDDWLAQR
PQPVAPEAAV PKQAQPPRQA PPAKPKKLTF AQNRELKELP AMIEALETEQ RLLQAAMADP
AFYRQAKEEI KARQKRLQEV EDKISACYRR WEELEDLTP
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