Gene Dole_0167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_0167 
Symbol 
ID5692984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand- 
Start bp186392 
End bp187033 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content40% 
IMG OID641262746 
ProductTetR family transcriptional regulator 
Protein accessionYP_001528054 
Protein GI158520184 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACTATAT CAAAAAATAA AGCTCGAATA CCGGTACAAA AGCGCAGCAT CGAAACCAAG 
GAAAAAATCC TAAACGCAGC TTGGGAGCTT TTTGCTGAAA AGGGATATTT TAAAACTAAT 
ACGAATGAGT TGGCCGAACG AGCCGGGATA GCCACGGGAT CCTTTTATGG ATATTTCAAT 
AACAAGAAGG AAGTTGGCAT AGAGTTAATG ATGCGCTTCT ATAAAGAAGT ATCTAAAAAG 
GCACTCTCCA ATTTTTACAT ACAGATCGGC GACAACGTTG CGGAAAACCT TGATACGGGA 
AGAAAGCTCG TTCGATTTAT AATTAAATCT TTAAAGGAAT CCCATGCCAT CAATCCGCTG 
CTTCACAAGG AAACCACAGC TTTGATTCTT CTGGATGAAG ATGTTAGAAA TATCAGCAGC 
GAAGAAGACA AAAAGATAAT CGCATTTTTA ATCACTCTCT TACAACAGCA TAAGCAGTTA 
ATTCGTGTGG ATGATATTGA AGCCGCTGCC GTCTTGCTGT TTAGGACAAG CGATGAGATT 
ATCCACCGGA TCATGATTCA TAAAGACGCA ATCGATGAAG ACCGGCTGCT CAAAGAGCTT 
GAAGACATGA TTTGCAGCTA TCTTTTTATC ACCGTCAGTT GA
 
Protein sequence
MTISKNKARI PVQKRSIETK EKILNAAWEL FAEKGYFKTN TNELAERAGI ATGSFYGYFN 
NKKEVGIELM MRFYKEVSKK ALSNFYIQIG DNVAENLDTG RKLVRFIIKS LKESHAINPL 
LHKETTALIL LDEDVRNISS EEDKKIIAFL ITLLQQHKQL IRVDDIEAAA VLLFRTSDEI 
IHRIMIHKDA IDEDRLLKEL EDMICSYLFI TVS