Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_0167 |
Symbol | |
ID | 5692984 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 186392 |
End bp | 187033 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 641262746 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001528054 |
Protein GI | 158520184 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACTATAT CAAAAAATAA AGCTCGAATA CCGGTACAAA AGCGCAGCAT CGAAACCAAG GAAAAAATCC TAAACGCAGC TTGGGAGCTT TTTGCTGAAA AGGGATATTT TAAAACTAAT ACGAATGAGT TGGCCGAACG AGCCGGGATA GCCACGGGAT CCTTTTATGG ATATTTCAAT AACAAGAAGG AAGTTGGCAT AGAGTTAATG ATGCGCTTCT ATAAAGAAGT ATCTAAAAAG GCACTCTCCA ATTTTTACAT ACAGATCGGC GACAACGTTG CGGAAAACCT TGATACGGGA AGAAAGCTCG TTCGATTTAT AATTAAATCT TTAAAGGAAT CCCATGCCAT CAATCCGCTG CTTCACAAGG AAACCACAGC TTTGATTCTT CTGGATGAAG ATGTTAGAAA TATCAGCAGC GAAGAAGACA AAAAGATAAT CGCATTTTTA ATCACTCTCT TACAACAGCA TAAGCAGTTA ATTCGTGTGG ATGATATTGA AGCCGCTGCC GTCTTGCTGT TTAGGACAAG CGATGAGATT ATCCACCGGA TCATGATTCA TAAAGACGCA ATCGATGAAG ACCGGCTGCT CAAAGAGCTT GAAGACATGA TTTGCAGCTA TCTTTTTATC ACCGTCAGTT GA
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Protein sequence | MTISKNKARI PVQKRSIETK EKILNAAWEL FAEKGYFKTN TNELAERAGI ATGSFYGYFN NKKEVGIELM MRFYKEVSKK ALSNFYIQIG DNVAENLDTG RKLVRFIIKS LKESHAINPL LHKETTALIL LDEDVRNISS EEDKKIIAFL ITLLQQHKQL IRVDDIEAAA VLLFRTSDEI IHRIMIHKDA IDEDRLLKEL EDMICSYLFI TVS
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