| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0161 |
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| Symbol | |
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| ID | 5692978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 176276 |
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| End bp | 177982 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641262740 |
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| Product | TrkA domain-containing protein |
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| Protein accession | YP_001528048 |
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| Protein GI | 158520178 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0569] K+ transport systems, NAD-binding component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000200021 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACCA TGGCCACGCA ACTCTCGCTG CTGCTTCAGG CCGACCGGCG CAGAGGGAAT
ATCCGGCTGC TGGTAAAATT CTGCCTGATG CTGGCCTGTT TTTTTGTTTT ATACAGTGTT
CTGTTCCATG TGCTCATGGT TTACGAAGGC CGCTCCTATT CCTGGATAAC CGGCTTTTAC
TGGACCCTGA CCACCATGTC CACCCTGGGG TTCGGAGACA TCACCTTCAC CAGCGATATC
GGAAAGGTTT TTTCCGTGGT GGTGCTGCTC AGCGGCATTA TCTTTCTACT GGTAATGCTG
CCCTTTACTT TTATTCAATT TTTTTACGCG CCCTGGCTGG AAGAGCAGAA CAAGGCCCGC
ACCCCGAGGG CCGTGGCTGA AGCGCTGTCC GGTCACGTGA TTTTTACCCA TTACGATGAC
ATTACCATCC ACCTGATCCG AAAGCTGGAG CAGCACCATA TCCGCTATGT TCTTCTGGTG
GCCGACCTGC AGGCGGCCCT GAACCTGCAC GACCAGGGCT ACCATGTCGT GGTGGGCGAC
CTGGACGACC CGGATACCTA TCCGCGCTTA AATGTCGACC GGGCCGCCCT GGTAGTGGTT
CTCAATGACG ACGTGGTCAG CACCAACATC ATTTACACCA TTCGTGAAAT AAGCCCTGAC
GTGATAACCG TAACCAACGC CGACCGGGAG GAGTCGCTGG ATATTCTCAA GCTGGCGGGC
AGCACCCATG TGCTGCAGAT GACCCGAATG CTGGGCCAGG CACTGGCCCG ACGCGTGTAC
GGGGTCAGCA TGACGGCCAA TGTCATCGGC CGGTTTGACG AGCTGCTGAT CGCCGAGGCG
TCGGCCATGC GGACCTGGCT TCAGGGAAAA ACCCTGGCGG AAAGCCGCCT TCGCCAGGTC
GCCGGCGTAA CGGTGGTCGG CATCTGGGAG CAGGGGCGCT TCATCATGCC CGGCCCCCAC
TCCCGCATCG GAGAATCCAC CGTACTGGTG CTGGCCGGAA CCGAAGAACA ATTGAACCTG
TTTGACCGTT CCATCGCCGG CAAAATGGCC GACAGCCATC AAAAGGGGCC GGTGCTGGTA
ATCGGCGGGG GGCGGGTGGG CACGGCAGTG GCCGATACGC TGAAAGGCCG GGAAGTTGAA
TTCCGGGTGG TGGAAAAACG GTCGGACATC GCTTCCCGTC ATGCCCATTA CATCGAGGGC
AGCGCCGCGG AACGGGAGGT GCTGGACCGG GCCGGCCTTC AGGAAACACC CGCGGTGATC
ATCACCACCC ATGACGACAA CCTGAACATT TACCTGACCA TCTATATTCG CCGTCTTCGC
CCGGATGTTC AAATTATCAG CCGTTCCAGC CTGGACCGCA ATATCACCAC CCTGCACCGG
GCCGGTGCCA ACCTGGTCCT GTCCTACAGC TCCCTCTTGA ACAGCACCAT TCTCAACCTG
CTGCAGCCCC AGAAAATGCT GATGCTTTCC GAAGGGCTCA ACATGTTTCG CGCCGCCCTG
AACGAAAAAA TGGTAAGTCA GGCACTGGCT GATCTCTCCA TCCGCGAGCA GACCGGGTGC
AGCGTCATGG CTGTAAAACG GGCCGGAGAG CTGATCGTCA ACCCGGATCC CGCCATTGTT
CTGGAAGCGG GGGATGAACT CCTGCTGATA GGGCTGACCG AAGCGGAAAA GACCTTCATG
GAACGGTATC CGCCGGACAA AAAATGA
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| Protein sequence | MKTMATQLSL LLQADRRRGN IRLLVKFCLM LACFFVLYSV LFHVLMVYEG RSYSWITGFY
WTLTTMSTLG FGDITFTSDI GKVFSVVVLL SGIIFLLVML PFTFIQFFYA PWLEEQNKAR
TPRAVAEALS GHVIFTHYDD ITIHLIRKLE QHHIRYVLLV ADLQAALNLH DQGYHVVVGD
LDDPDTYPRL NVDRAALVVV LNDDVVSTNI IYTIREISPD VITVTNADRE ESLDILKLAG
STHVLQMTRM LGQALARRVY GVSMTANVIG RFDELLIAEA SAMRTWLQGK TLAESRLRQV
AGVTVVGIWE QGRFIMPGPH SRIGESTVLV LAGTEEQLNL FDRSIAGKMA DSHQKGPVLV
IGGGRVGTAV ADTLKGREVE FRVVEKRSDI ASRHAHYIEG SAAEREVLDR AGLQETPAVI
ITTHDDNLNI YLTIYIRRLR PDVQIISRSS LDRNITTLHR AGANLVLSYS SLLNSTILNL
LQPQKMLMLS EGLNMFRAAL NEKMVSQALA DLSIREQTGC SVMAVKRAGE LIVNPDPAIV
LEAGDELLLI GLTEAEKTFM ERYPPDKK
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