| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0156 |
|---|
| Symbol | |
|---|
| ID | 5692973 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | + |
|---|
| Start bp | 172147 |
|---|
| End bp | 173331 |
|---|
| Gene Length | 1185 bp |
|---|
| Protein Length | 394 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641262735 |
|---|
| Product | acetyl-CoA acetyltransferase |
|---|
| Protein accession | YP_001528043 |
|---|
| Protein GI | 158520173 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
|---|
| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00117931 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGACG CTTATATTGT TACATCGGTC AGAACACCGG GCTGCAAGAA CCGGCGGGGC
GCCCTGAAAG ACACCCGCCC CGAGGACCTG ATTTCCTTTA TCATCAACGC GGCCATGGAA
AAAACCGCGG GTCTTGAGAA AAAAGACGTG GACGACCTGA TGCTGGGCTG TTCCTTTCCC
GAGGCCGAGC AGGGCCTGAA TATCGGCCGT ATTGCCGTCC AGATGGCCGG TTTTCCGGAC
CAGGTGTCCG GCGCCACGGT CAACCGTTTC TGCTCTTCCG GCCTGGAAGC CATTGCCCTG
GCATCGCTGC GGGTCATGTC CGGCTGGTCG GACGTCACCC TGGGCGGCGG CGTCGAGTCC
ATGACCTACG TGCCCATGGG CGGCAACCTG CCCCGCCCTC ATCCGGAATG GTCTCGCGAG
CGGGCCGACT ACTACGTGTC CATGGGCATC ACCGCGGAAA ACGTGGCCAA CCGCTACAAA
ATTTCCAGAG AAGATCAGGA CGCGTTTGCC TACCAGTCCC AGATGAAGGC CTCCAAGGCC
AAGGCGGAAA AGCAGTACAC TGAGATCGTT CCCACCCCGG CCACCAAATT TGTGAAGCAG
GCCGACGGCA CCGTCAAAAA GGAGACCTTT CTGCAGGACT TTGACGACGG TATCCGGGAG
GCCACCACCG TGGAAGGACT GGCCAAGCTG CGGCCCGTGT TTGCGGCCGG CGGTTCGGTC
ACGGCGGGCA ACTCCTCCCA GACAACGGAC GGGGCTGCCG TTTCCGTCAT CATGAGCGAA
AACAAGGTCA AGGAGCTGGG CCTCAAGCCC ATTGCCAAGC TCAAGATCTA CACCACGGTG
GGGTGCCGGT CCGACGAGAT GGGCGTGGGC CCGCGGTATG CGATTCCCAA GCTGCTGGAC
AAGGCCGGTC TGAAGGTCGA GGACATCGGC CTGTGGGAGA TCAACGAAGC CTTTGCCTCT
CAGGCCCTGT ACTCTATCCG GGAGCTGGGG ATTGACAAGT ACATGGACCG GGTCAACATT
CACGGCGGCG CCATTGCCCT GGGCCATCCT TTGGGCTGCA CCGGCGCCAA GCTTTGCGCC
ACGTTGCTTG CCAACATGCA GGCCAGGGGC GTCAAGTACG GCGTGGAGTC CATGTGCATC
GGCGGCGGCA TGGGCGCGGC CGGCCTGTTT GAGCTGTGTG ACTAA
|
|---|
| Protein sequence | MRDAYIVTSV RTPGCKNRRG ALKDTRPEDL ISFIINAAME KTAGLEKKDV DDLMLGCSFP
EAEQGLNIGR IAVQMAGFPD QVSGATVNRF CSSGLEAIAL ASLRVMSGWS DVTLGGGVES
MTYVPMGGNL PRPHPEWSRE RADYYVSMGI TAENVANRYK ISREDQDAFA YQSQMKASKA
KAEKQYTEIV PTPATKFVKQ ADGTVKKETF LQDFDDGIRE ATTVEGLAKL RPVFAAGGSV
TAGNSSQTTD GAAVSVIMSE NKVKELGLKP IAKLKIYTTV GCRSDEMGVG PRYAIPKLLD
KAGLKVEDIG LWEINEAFAS QALYSIRELG IDKYMDRVNI HGGAIALGHP LGCTGAKLCA
TLLANMQARG VKYGVESMCI GGGMGAAGLF ELCD
|
|---|
| |