| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0155 |
|---|
| Symbol | |
|---|
| ID | 5692972 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | + |
|---|
| Start bp | 169729 |
|---|
| End bp | 172134 |
|---|
| Gene Length | 2406 bp |
|---|
| Protein Length | 801 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 641262734 |
|---|
| Product | 3-hydroxyacyl-CoA dehydrogenase NAD-binding |
|---|
| Protein accession | YP_001528042 |
|---|
| Protein GI | 158520172 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000365232 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGAA AGATTAAAAA AGCCGCTGTC ATCGGATCCG GCGTGATGGG CGGCGGCATC
GCCGCGCTGC TGGCCAGCGC GGGCGTCGAG ACCCTGCTGC TCGACATTGT TCCCTTTGAT
CTGACCGATG AGCAGAAAAA AGATCCCGCG GCACGGAACC GCATCGTAAA GTTCGGGTAT
GACACGATTA TGATGTCCCG GCCCGCGGCC CTGATGCATT CGTCGGACGC GGCCCTGATC
TCCATCGGCA ACCTGGAGGA CGATTTCGAC AAGCTGGCCG ACTGCGACTG GATCGTGGAG
GTGGTAGTGG AGAACCTCAA GATCAAGCAG CAGCTGTTCA AGCGCATCGA ACCGGTGCGA
AAAAAGGGCA GCATCATCTC CTCCAACACC TCGGGCATTC CCCTCAAGGC CATGTCCGAA
GGCCTGAGTT CCGATTTTAA ACAGCATTTT CTGGGCACTC ACTTTTTCAA CCCGGTGCGG
TACATGCACC TTTTGGAAAT TATCAAGGGT GAGGAGACCT CTGAAGAAGT ACTCCGTTTC
ATGGCCGCGT TCGGTGAAAA GCGGCTGGGC AAAGGCATTG TGTGGGCCAA GGACACCCCC
AACTTTATCG GCAACCGCAT CGGGGTCCAG GGCATTGTCA AGGCCATGCA GCTGATGCTG
GAGATGGGAC TGACCATTTC CGAGGCCGAC GCCCTGTTCG GACCGGTCAT GGGCCGGCCC
AAGACCGCCA TGTTCAAGAC CACCGACCTG GTAGGCCTGG ACACCATGAG CCATGTGGCC
AAAAACACCT ATGACCTGGT GACCGACGAC GAGGCCAGAG ATGACTTTCT GACCCCGGAC
TTTGTTTCAA CCATGATCGA AAAGAAGCTG CTGGGCAACA AGACCAAGGC CGGTTTCTAC
AAGACGGACA GAAGCCCGGA GGGCAAAAAG CTTCGCCTGG TGATCAATCC CGCCACTCTG
GAGTATGAAT CCGCCGGTGA CGTGGATTTC CCCTGCATTG CCGATGCCAA GTCCAAAAAG
ACCCTGCCGG AAAAGATGAA GGCCATTGTG TACGGCGAGG ACAAGGGCGC GGCCTACGCC
TGGAAGGTGG TGGCGTCCGG TCTGATCTAC GCGGCCAACC GGGTGCCGGA GATTTCCGAT
ACCATCGTGG AGATCGACAA TGCCATGAAG TGGGGCTACA ACTTTGAAAT GGGTCCCTTT
GAAACATGGG ATGCCATCGG CGTGGCCGAA TCCGTGGCAA AGATGGAAAA GGACGGCCTG
GCCGTTCCGG AAAAGGTCAA GAAGATGCTG GCCGACGGCA ACCAGACTTT TTATAAGATC
GAAAAAGGCC AGACCCTGTT TTATGATTTT GCCTCCGGGT CTTACAAGGC TGTGCCGGTA
AGCGATGTGG CGGTTTCCCT GGCCATTCTC AAGGGAGAGG GCCGGGAGGT CAAAAGCTGC
AAGTCCGCCT CCCTGATCGA CCTGGGTGAC GGCGTGTTCT GCTGCGAGTT TCACACCAAG
ATGAACGCAT TGAACACCGA ACTGATCGCC TTCATGCACG AGGCCATGGA CTATGTGGAT
GCCAACGGCG CCGGCATGGT GCTGGGCAAC CAGGCCGGCG GCATGCCCGG GGCCTTTTCC
GCGGGCGCCG ACCTCAAGGA GATCCTGACC GCTGTGGGCA ACAAGGAGTT TGACGGCATT
GACACAATGA TCGATTCCCT GCAGCAGGCC GTGCAGCGCG AGCGCTACTC CCACTTTCCC
GTGGTGGCGG CACCCTACGG CATGGCCCTG GGCGGCGGCT GCGAGGTGTG CCTGGGCGCC
GACCGGATCG TGGCCCATGC AGAGCTTTAC ATGGGCCTGG TGGAAATCGG GGTGGGCGTG
CTGCCCGCCG GCACCGGGTG CATGAACCTG TGGAAAAAGA TGACCAGCGG CATTCCCGCG
CCGGTGACCG ACGCCGACCT GGCCAAGTTC TTCATTCCCA CCTTCATGGC CATTGCCATG
GCCAAGGTGT CCATGTCCGC GGCCGAGGCC CGGGCCAACG GTTTTCTGGG GCCCAACGAC
AGAATCGTGT TCAACCGGGA CAACCTGATC GGCGAGGCCA AAAAAGAGGT GCTGCGCATG
ATCGACGACG GTTACGCGCC GCCGGCCAAA AAGCCCCTCA AGGTGCTGGG CGAGGCGGCC
TGGGGTATGG TCAACGCGGA AATTTTCAAC ATGCAGAACG GCGGCTATGT CAGCGAATAC
GACGCCTACC TGGCCAAAAA CATTGCTTAT GTCATTGCCG GCGGCGACGC CCGGACCAAC
AGCGAGCTGG ATGAGCAGGC CATTCTCAAC CTGGAGAGAT CCATGTTTAT CGAATTTCTC
AAGCAGGAAA AGACCATGGC CCGCATCGAA CACATGCTCA AAACCGGCAA ACCGCTTCGC
AACTAA
|
|---|
| Protein sequence | MSRKIKKAAV IGSGVMGGGI AALLASAGVE TLLLDIVPFD LTDEQKKDPA ARNRIVKFGY
DTIMMSRPAA LMHSSDAALI SIGNLEDDFD KLADCDWIVE VVVENLKIKQ QLFKRIEPVR
KKGSIISSNT SGIPLKAMSE GLSSDFKQHF LGTHFFNPVR YMHLLEIIKG EETSEEVLRF
MAAFGEKRLG KGIVWAKDTP NFIGNRIGVQ GIVKAMQLML EMGLTISEAD ALFGPVMGRP
KTAMFKTTDL VGLDTMSHVA KNTYDLVTDD EARDDFLTPD FVSTMIEKKL LGNKTKAGFY
KTDRSPEGKK LRLVINPATL EYESAGDVDF PCIADAKSKK TLPEKMKAIV YGEDKGAAYA
WKVVASGLIY AANRVPEISD TIVEIDNAMK WGYNFEMGPF ETWDAIGVAE SVAKMEKDGL
AVPEKVKKML ADGNQTFYKI EKGQTLFYDF ASGSYKAVPV SDVAVSLAIL KGEGREVKSC
KSASLIDLGD GVFCCEFHTK MNALNTELIA FMHEAMDYVD ANGAGMVLGN QAGGMPGAFS
AGADLKEILT AVGNKEFDGI DTMIDSLQQA VQRERYSHFP VVAAPYGMAL GGGCEVCLGA
DRIVAHAELY MGLVEIGVGV LPAGTGCMNL WKKMTSGIPA PVTDADLAKF FIPTFMAIAM
AKVSMSAAEA RANGFLGPND RIVFNRDNLI GEAKKEVLRM IDDGYAPPAK KPLKVLGEAA
WGMVNAEIFN MQNGGYVSEY DAYLAKNIAY VIAGGDARTN SELDEQAILN LERSMFIEFL
KQEKTMARIE HMLKTGKPLR N
|
|---|
| |