| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0138 |
|---|
| Symbol | |
|---|
| ID | 5692953 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | + |
|---|
| Start bp | 151327 |
|---|
| End bp | 152805 |
|---|
| Gene Length | 1479 bp |
|---|
| Protein Length | 492 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641262715 |
|---|
| Product | CoA-binding domain-containing protein |
|---|
| Protein accession | YP_001528025 |
|---|
| Protein GI | 158520155 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1042] Acyl-CoA synthetase (NDP forming) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0892765 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACC CGATTGAAGC CCACCGGCTC TATGGCATGA CCCACCCGAA ATCTGTCGCT
ATTTTCGGGG CTTCCAATAA CCACTCCTCC ATGGGCACCA TCATTCTGCG GGCCATGATG
GCGTTTGATT TTCCCGGAAA AATCTATCCG GTTCATCTCA AGGAAAAAGA GGTGCAGGGC
CTGACCGCCT TTGACAGTGT TGAGTCCCTG CCCGAGGCCC CGGACCTGGC CGTGATCGTG
CTGCCCACCC GAATCGTGTG CGAGACGATG GAGGCCTGCG GGAAAAAGGG CATTCGCAAC
GCCATCGTGG TGTCCGGTGG TTTCAAGGAG GTGGGACCGG AAGGGGCCGA GCGGGAAAAA
GAGCTGGCCG CCATTGCCGG TAAATACGGC ATCAGCATCA TCGGCCCCAA CTGCCTGGGC
GTCACCAACG CCCATGCCCG GCTCAACACC ACGCCCCACC GGTATTACGG AAAGCCGGGG
TTTATCGGCC TGGTCTCACA AAGCGGCAGT TTCGTGACCC AGATGTTTGC CTACCTGGAC
CAGCTTCACC TGGGCTTTTC CACGGCCTTC AGCATCGGCA ACGAGGTCAA TACCGACCTG
GTGGACTGCC TGGAGTTCCT GGGGGCCTGC CCGGACACAA AGGTTATCGC TCTTTACGTG
GAGGCCATTC GCCGGGGCCG CAAGTTTGTT GAAACGGCGC GAAAGATCGT TCCCCACAAA
CCCATCGTGG CGCTTTACGT GGGCGGATCG GAAACCGGCC GCAAGGCGGC CCTTTCCCAC
ACCGGGTCCA TGTCCGGACC CGATGACCTC TATTCGGGCA TCTTCCGGCA GAGCGGCGTG
ATCCGGGTTT CGTCCATCAC CGAGCTGTTT GACTGCTGCA TGGCGTTCGG CCATCTGCCC
CAGCCCGCGG CCAACCGGGT CTTTATTCAG ACCCACTCCG GCGGCCCCGG GGCCGTTGCC
GCTGATGCCT GCGGCCGGTC CGGGCTTGTG CTGCCCGAAC CCTCGGCGAA AACCGCTGAA
AAGCTCAAAG CCCTGGTGCC GGCCACGGGC AGCGTGAAAA ATCCCATTGA CCTGACCTTT
ACCAAGGACA TGACCCAGTT TTTCGCCGAC ATTCCCGGCG TCCTGCTGGA AGATCCCGGT
TGCGACGCCC TGATGTTCTA TTATTATACG CCCGCGGACA TGATCAAGCG GGTGCTCCTG
CAGATGGGCG TACCGGCCGC TGAACTGGAC GCCAAGATGG ACGAGGTGTC GCAACACATT
TCCGCCCAGA TGCAGGGACT CATCAAGCGG TCCGGCAAGC CGGTATTCTG CTTTTCCTAC
CAGGGCCGGT CTGAAACTGC CGTCCAGTCG CTTTCGGCCC TGGGCGTTCC CTTTTACCAG
GGTCCGGAAC GGGCCGTGCG CGCGCTTGCG GCCATGGTGG CCTACGGCAC GCTCAAGGAA
AAAATCGTCC GCCAGTCCGG CATCGATCCC TCGGCCTGA
|
|---|
| Protein sequence | MTDPIEAHRL YGMTHPKSVA IFGASNNHSS MGTIILRAMM AFDFPGKIYP VHLKEKEVQG
LTAFDSVESL PEAPDLAVIV LPTRIVCETM EACGKKGIRN AIVVSGGFKE VGPEGAEREK
ELAAIAGKYG ISIIGPNCLG VTNAHARLNT TPHRYYGKPG FIGLVSQSGS FVTQMFAYLD
QLHLGFSTAF SIGNEVNTDL VDCLEFLGAC PDTKVIALYV EAIRRGRKFV ETARKIVPHK
PIVALYVGGS ETGRKAALSH TGSMSGPDDL YSGIFRQSGV IRVSSITELF DCCMAFGHLP
QPAANRVFIQ THSGGPGAVA ADACGRSGLV LPEPSAKTAE KLKALVPATG SVKNPIDLTF
TKDMTQFFAD IPGVLLEDPG CDALMFYYYT PADMIKRVLL QMGVPAAELD AKMDEVSQHI
SAQMQGLIKR SGKPVFCFSY QGRSETAVQS LSALGVPFYQ GPERAVRALA AMVAYGTLKE
KIVRQSGIDP SA
|
|---|
| |