| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0103 |
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| Symbol | |
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| ID | 5692918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 115053 |
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| End bp | 116078 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641262680 |
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| Product | single-stranded nucleic acid binding R3H domain-containing protein |
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| Protein accession | YP_001527990 |
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| Protein GI | 158520120 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1847] Predicted RNA-binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGACA CAAAAGAGTT TGAAGGCAAA AATATTGACG CGGCCCTGGA AAAGGCCAGC
AGCGCCCTTA ACATGACCAA AGACCAGTTG CGCTACGAGG TGGTCTGTAC CGGGTCCAGC
GGCATTTTCG GGCTGGTGGG GGTTAAAAAC GCCCGCATTC GAATTCTCAA TTCGAAAAAA
GGGTCGGGGG GCGCCGGAGC AGGGGGCAGG CGGGACGTGC TGGACGAGGA CCGGCAGGAG
ATTCTCTCCA TGCTGGACGA GGCTTTTGCC GAACCGGCCC CTGAACCCGA AAGCCGGCCC
AGGCCCGAGG CTAAAGCAGC GCCCAGGGGA GAGCCCAGGG CTGAGTCGAA AAAAGCGCCC
AGGGCCAAAC CCAAATCCCG GCCCCGGACG GAAAAAGGGG CTCCTGCCCC GGCTGAACGG
TCAAGGGCGG CCGGCCGGCC GCCGGCAAAC GGGGCCAAGC CCCCTGCACC GGAGGAGCGC
CCAGAGACAC CGCCGGCCGC TTCAGAGGAA CTGCCGGAAT CGCCGCCGGC ACCGCCTGTT
GAGGTGAAAG AGGCGGACGT GGTTCTGGCC CGGGACGTTT TGAGTAAAAT ACTGGACAAC
ATCACCGACG AAGCCACGGT GAAAGTGGCG TTCGAGCCGG GCCGGGTCGG TTTTTCCATG
GAGGGCGGCA ACTCATCGGT GCTCATCGGC AAGCGCGGCA AAACCCTGAA GGCCATGCAG
CATATTGTTG AAAAGGTGGT TAAAAAATCG ATGGGTGAGG CGGTGGAGGT GCAGGTGGAC
GTGGAAGGGT ATCTGGAAAA ACGGGCATCC TCCCTGACAA CCCTTGCCTC CCGTCTGGCT
GAAAAGGCCC GGCAGACCGG CAAGCCCACC ACCATCAGCC GAATGGACGC CTACGAGCGG
AAGATCATTC ATGACGCCCT GCGGACCGAC AGAAGCGTGA AAACCCGCAG CGTGGGAAAC
GGGGACATTC GAAACGTGGT GATCCATCCC GGACGGCGGA CCAGCCGTAA AAAAACGGCG
CCATAA
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| Protein sequence | MTDTKEFEGK NIDAALEKAS SALNMTKDQL RYEVVCTGSS GIFGLVGVKN ARIRILNSKK
GSGGAGAGGR RDVLDEDRQE ILSMLDEAFA EPAPEPESRP RPEAKAAPRG EPRAESKKAP
RAKPKSRPRT EKGAPAPAER SRAAGRPPAN GAKPPAPEER PETPPAASEE LPESPPAPPV
EVKEADVVLA RDVLSKILDN ITDEATVKVA FEPGRVGFSM EGGNSSVLIG KRGKTLKAMQ
HIVEKVVKKS MGEAVEVQVD VEGYLEKRAS SLTTLASRLA EKARQTGKPT TISRMDAYER
KIIHDALRTD RSVKTRSVGN GDIRNVVIHP GRRTSRKKTA P
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