| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0094 |
|---|
| Symbol | |
|---|
| ID | 5692909 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | + |
|---|
| Start bp | 103072 |
|---|
| End bp | 104205 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 641262671 |
|---|
| Product | DNA polymerase III, beta subunit |
|---|
| Protein accession | YP_001527981 |
|---|
| Protein GI | 158520111 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
|---|
| TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000000475987 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTTT CCGTTGAAAA AAAAGACATC ATTGAAATGC TGGCCAATGT CCAGGGGATA
GCGGGGAAAA GGTCCAGCCT TGCCATCACT GAAAACATTT TAATTAAAAC CGGAAAAGAG
GGGATATCCG TATCCGCAAC GGATATAGAG ACCGGTTTTG AAGGTATCTA TCCGGCCACG
ATCGAAAACG AGGGCACCAT TGCCATTAAC GCGCGGCAGT TTTATGAGAT TGTAAAAAAA
ATAGACAGTA ATATTATATA TTTAAGAGAA GAAAAAAAGC AGTGGATTCA GATCAGCGAC
ACAGAGGACG GATCCCGTCT TAAATATCAG ATCATGGGTG GAGAGACTGA AAGTTTTCCT
CAACTTCCGG TCATCGCCGA TGTTTCCTAT ATAGATGTAA ATTCTGCTGA TTTTAAAAAT
ATGATTTTGT GGGCAACAGT GATCACCTCC AGTGGAACTG AAAAAAGGGC CCATGTGATC
GGCGCCAATC TGGAATATAT TAAAGACGGA AAAATAAAAA AAATAAGAAT GGTTTCAACT
GACGGAAAAA GGCTGACAAA AACAGAGTAT TCCTACAAAA AAGGAGAACC CGACACGCCG
GAGACCAGCA CGATTCTTCC CAAAAAAGCC TTAAATGAAC TGTTTAAATT TTTAAAAGAT
GAGGGAACTA TTCAGATAGG CACCCGGGAT AATTATTTTA TAGTTAAAAA TAATAATGAA
ATCATATATA TAAATCTTTT AAGCGGTGAA TACCCGAACC TTGAAACGCT TTTTTCTGAC
GAAAAGGGCA GAACCGAAAT AAAAATAAAC CGAAAAAAAT TAAAAGACAT GCTGGAACGG
ATGTCCATAT TAACGACTGA TAATTATAAG GGCGTTATTT TTACATTTGA AAAAAATATT
CTCACCATCA ATGCCCAGAA TCCGGATCGG GGAGAATCTT ATGAATGGAT GGATATTCAG
TATGATAAAA AACAGATTAA ATCCATGTTC AACCCGGATT ATTTTATTGA TGCGGTCAAT
CTGATCGAAG ATGACGAGGT CTGTCTGAAA TTAAAAGAAG ATCAGGCCCC CTGTATTGTC
TGTGGCGGCA AACATCCGGA AAATATTAAC ATCATTATGC CGATGAAAAT TTAA
|
|---|
| Protein sequence | MKLSVEKKDI IEMLANVQGI AGKRSSLAIT ENILIKTGKE GISVSATDIE TGFEGIYPAT
IENEGTIAIN ARQFYEIVKK IDSNIIYLRE EKKQWIQISD TEDGSRLKYQ IMGGETESFP
QLPVIADVSY IDVNSADFKN MILWATVITS SGTEKRAHVI GANLEYIKDG KIKKIRMVST
DGKRLTKTEY SYKKGEPDTP ETSTILPKKA LNELFKFLKD EGTIQIGTRD NYFIVKNNNE
IIYINLLSGE YPNLETLFSD EKGRTEIKIN RKKLKDMLER MSILTTDNYK GVIFTFEKNI
LTINAQNPDR GESYEWMDIQ YDKKQIKSMF NPDYFIDAVN LIEDDEVCLK LKEDQAPCIV
CGGKHPENIN IIMPMKI
|
|---|
| |