| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0086 |
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| Symbol | rplU |
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| ID | 5692901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 95992 |
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| End bp | 96306 |
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| Gene Length | 315 bp |
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| Protein Length | 104 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641262663 |
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| Product | 50S ribosomal protein L21 |
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| Protein accession | YP_001527973 |
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| Protein GI | 158520103 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0261] Ribosomal protein L21 |
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| TIGRFAM ID | [TIGR00061] ribosomal protein L21 |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000109341 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTACGCTG TAATTGCTAC CGGTGGAAAA CAGTACCGGG TCGAAAAAGA CGAGGTGTTG
AGGCTTGAAA AGCTTCCCGG TCAGGTGGGG GACACGGTCT CCTTTGACCA GATTCTGCTG
TTTTCAGACG GCGAATCCGT TTCCGTGGGA ACCCCTGTTC TGGGCAATGT CACTGTCTCC
GGTAAAATCG TGGAGCAGGA CAGGGCCAAA AAAATCCTGG TCTTTAAAAC CAAGCGACGG
AAACGGTATC GTCGCAAGCA GGGTCACCGC CAGTCGTTTA CCGCCGTCCG GATCGAAACC
ATTCAGGCGG GATAA
|
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| Protein sequence | MYAVIATGGK QYRVEKDEVL RLEKLPGQVG DTVSFDQILL FSDGESVSVG TPVLGNVTVS
GKIVEQDRAK KILVFKTKRR KRYRRKQGHR QSFTAVRIET IQAG
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