| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0084 |
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| Symbol | |
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| ID | 5692899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 94358 |
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| End bp | 95512 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641262661 |
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| Product | queuine tRNA-ribosyltransferase |
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| Protein accession | YP_001527971 |
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| Protein GI | 158520101 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
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| TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000052368 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTCAGT TTGAAACCAC GACCGCCTGT CCCGACACAA AGGCCCGTAC CGGAAAAATG
ACAACCGCCC ACGGCGACGT GGCCACCCCG GTGTTTATGC CGGTGGGCAC CCTGGCCACG
GTCAAATCGC TGTCGCCCGA AGATCTTGTC GCCTGCGGGG CCCAGATCAT TCTGGGCAAC
ACCTATCACC TCTACCTGCG GCCGGGGTGC GACATCATTG ACGCCTTTTC CGGGGTCCAT
GCCTTTATGG GCTGGAACCG GCCCCTTCTC ACGGACAGCG GTGGGTTTCA GGTCTTTTCC
CTGGCCAAGC TCTCCCGCAT CACCGAAGAG GGGGCCGCGT TTCAGTCCCA TCTGGACGGC
TCCAGCCACC TGCTGACACC CGAGTCGGTG ATCGACATTC AAAACCGGCT GGGTTCCGAC
ATTCAGATGT GCCTGGACCA GTGCATCGCC TTTCCGGCCG AAAAAGGGGC GGCCCGGGAC
GCGGCAAACC TTACCACCCG GTGGGCCGGC CGGTGCCGGA ACCGGTGGCA AGAGACCGGC
GGTCCGTCCC GGTGCGGGCT GTTCGGCATT GTCCAGGGCG GCATGTTTGA CGACCTGCGC
GCCGATTCGG CCGGCCGTCT GGTGGACCTG GACTTTTCCG GGTATGCGGT AGGCGGCCTG
AGCGTGGGCG AACCGATAGA GACGCGGCTG GCCGTGGCCG AACACACCCT GTCCCTGCTG
CCGCCGGACA GGCCCCGCTA TATCATGGGC GTGGGTACGC CGGCGGAGCT GGTGGAGCTG
GTGGCCCTGG GCGCAGACAT GTTCGACTGC GTCATGCCCA CCCGGAACGC CAGAAACGGC
AAACTTTTTA CCAGCTTCGG CGCCATCAAC ATCCGCAATG CCTGCCACGC GAAAGAGACC
GGGCCCGTGG ATCCGGCATG CACCTGTTAC ACCTGCACCC GCTTTTCCCG GGCCTATCTC
CGACACCTGT TCATGTCCCG GGAGCTGCTG GCCTATCGCC TTGCAACTCT TCACAATCTC
TTCTATTATA TAAACCTGAT AAACGACGCA CGCGCCGCAG TGGCTGCCGG CCGGTTTGCC
GCCTTTCGAA AGGCCTTTTA CGCCGCGCAG CAGGCGACAG GCCCCACGGG AAAAGAGCCC
TGCGCCGGCT CTTGA
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| Protein sequence | MFQFETTTAC PDTKARTGKM TTAHGDVATP VFMPVGTLAT VKSLSPEDLV ACGAQIILGN
TYHLYLRPGC DIIDAFSGVH AFMGWNRPLL TDSGGFQVFS LAKLSRITEE GAAFQSHLDG
SSHLLTPESV IDIQNRLGSD IQMCLDQCIA FPAEKGAARD AANLTTRWAG RCRNRWQETG
GPSRCGLFGI VQGGMFDDLR ADSAGRLVDL DFSGYAVGGL SVGEPIETRL AVAEHTLSLL
PPDRPRYIMG VGTPAELVEL VALGADMFDC VMPTRNARNG KLFTSFGAIN IRNACHAKET
GPVDPACTCY TCTRFSRAYL RHLFMSRELL AYRLATLHNL FYYINLINDA RAAVAAGRFA
AFRKAFYAAQ QATGPTGKEP CAGS
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