Gene Dole_0083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_0083 
Symbol 
ID5692898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp93215 
End bp94264 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content64% 
IMG OID641262660 
Productqueuosine biosynthesis protein 
Protein accessionYP_001527970 
Protein GI158520100 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0809] S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) 
TIGRFAM ID[TIGR00113] S-adenosylmethionine:tRNA ribosyltransferase-isomerase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0181092 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTCTTG TCTCCGATTA CGATTATGAC CTGCCGCCGG ACAGAATCGC CCAGCAGCCG 
GTAACCCAAC GGGACAGCAG CCGCCTGCTG CGGCTGGACC GCGCCCGCGG CGGCATTTCC
CATCACCGGT TTTACGACCT GCCCGACCTG TTGCGGCCCT CGGACCTGCT GGTGGTCAAC
AACACAAGGG TGGTGCCGGC CCGGCTGGAA GGGATCAAGG AGACCGGGGG CCGGGCCGGG
GCGCTGATCC TGGATTACCC GGGCGTCCGC ACGGAAAAAG GCGTGATATG CCGCTGCATG
GTCAAGGCCT CGGGCCGCCT TCGGCCGGGC ACGCGGTTTC TCTTTGAAGA CAGGCTTTCC
GCCAGCGTGG TGGACGCCGC CGACGGCCTC TACACCCTTT GCTTTTCCTG CGACGGTGAT
TTTGACCAAA CGCTTTTTGC CGTGGGACGA ACCCCGCTGC CGCCCTATAT CACACGAAAC
CGGGACGGGG CCCCCTGCGA CGACCGGACC TGTTACCAGA CCGTCTATGC CGACCGGGAC
GGGGCCGTGG CCGCGCCCAC GGCCGGGCTT CACTTTACGC CGAACGTGCT GGACCGTCTG
GCGGCAAAAG GCATCTCCAC GGCACCGGTC ACCCTGCACG TGGGCCACGG CACCTTTCTG
CCGGTGCGGG TTTCCGACAT TCGGGACCAT GCCATGCACA GCGAACGATT TGAGGTCCCG
GCAGCTACGG CGGCAGCCAT CAACGCCACC CGGCGCGACG GCGGCCGGGT GGTGGCTGTC
GGCACCACGG TGGTCCGCAC CCTGGAGTAC GTGGCCCGCA CATGCGGCGA GATTCGCGCC
TTTTCCGGCG CCTGTGACCT GTTCATCTAC CCGGGGTATA ATTTTCAGGC CATCGCCGCC
ATGATCACAA ATTTTCACCT GCCCCGGTCC ACCCTGCTGA TGCTGGTCTC CGCATTTACC
GGCAGAGAAA AGGTTCTGGC CGCCTATGAA GCAGCCATTC AGGAAAAATA CCGGTTCTAC
AGCTACGGTG ACGCCATGTT GATAGAATAA
 
Protein sequence
MFLVSDYDYD LPPDRIAQQP VTQRDSSRLL RLDRARGGIS HHRFYDLPDL LRPSDLLVVN 
NTRVVPARLE GIKETGGRAG ALILDYPGVR TEKGVICRCM VKASGRLRPG TRFLFEDRLS
ASVVDAADGL YTLCFSCDGD FDQTLFAVGR TPLPPYITRN RDGAPCDDRT CYQTVYADRD
GAVAAPTAGL HFTPNVLDRL AAKGISTAPV TLHVGHGTFL PVRVSDIRDH AMHSERFEVP
AATAAAINAT RRDGGRVVAV GTTVVRTLEY VARTCGEIRA FSGACDLFIY PGYNFQAIAA
MITNFHLPRS TLLMLVSAFT GREKVLAAYE AAIQEKYRFY SYGDAMLIE