Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_0083 |
Symbol | |
ID | 5692898 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 93215 |
End bp | 94264 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641262660 |
Product | queuosine biosynthesis protein |
Protein accession | YP_001527970 |
Protein GI | 158520100 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0809] S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) |
TIGRFAM ID | [TIGR00113] S-adenosylmethionine:tRNA ribosyltransferase-isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0181092 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTCTTG TCTCCGATTA CGATTATGAC CTGCCGCCGG ACAGAATCGC CCAGCAGCCG GTAACCCAAC GGGACAGCAG CCGCCTGCTG CGGCTGGACC GCGCCCGCGG CGGCATTTCC CATCACCGGT TTTACGACCT GCCCGACCTG TTGCGGCCCT CGGACCTGCT GGTGGTCAAC AACACAAGGG TGGTGCCGGC CCGGCTGGAA GGGATCAAGG AGACCGGGGG CCGGGCCGGG GCGCTGATCC TGGATTACCC GGGCGTCCGC ACGGAAAAAG GCGTGATATG CCGCTGCATG GTCAAGGCCT CGGGCCGCCT TCGGCCGGGC ACGCGGTTTC TCTTTGAAGA CAGGCTTTCC GCCAGCGTGG TGGACGCCGC CGACGGCCTC TACACCCTTT GCTTTTCCTG CGACGGTGAT TTTGACCAAA CGCTTTTTGC CGTGGGACGA ACCCCGCTGC CGCCCTATAT CACACGAAAC CGGGACGGGG CCCCCTGCGA CGACCGGACC TGTTACCAGA CCGTCTATGC CGACCGGGAC GGGGCCGTGG CCGCGCCCAC GGCCGGGCTT CACTTTACGC CGAACGTGCT GGACCGTCTG GCGGCAAAAG GCATCTCCAC GGCACCGGTC ACCCTGCACG TGGGCCACGG CACCTTTCTG CCGGTGCGGG TTTCCGACAT TCGGGACCAT GCCATGCACA GCGAACGATT TGAGGTCCCG GCAGCTACGG CGGCAGCCAT CAACGCCACC CGGCGCGACG GCGGCCGGGT GGTGGCTGTC GGCACCACGG TGGTCCGCAC CCTGGAGTAC GTGGCCCGCA CATGCGGCGA GATTCGCGCC TTTTCCGGCG CCTGTGACCT GTTCATCTAC CCGGGGTATA ATTTTCAGGC CATCGCCGCC ATGATCACAA ATTTTCACCT GCCCCGGTCC ACCCTGCTGA TGCTGGTCTC CGCATTTACC GGCAGAGAAA AGGTTCTGGC CGCCTATGAA GCAGCCATTC AGGAAAAATA CCGGTTCTAC AGCTACGGTG ACGCCATGTT GATAGAATAA
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Protein sequence | MFLVSDYDYD LPPDRIAQQP VTQRDSSRLL RLDRARGGIS HHRFYDLPDL LRPSDLLVVN NTRVVPARLE GIKETGGRAG ALILDYPGVR TEKGVICRCM VKASGRLRPG TRFLFEDRLS ASVVDAADGL YTLCFSCDGD FDQTLFAVGR TPLPPYITRN RDGAPCDDRT CYQTVYADRD GAVAAPTAGL HFTPNVLDRL AAKGISTAPV TLHVGHGTFL PVRVSDIRDH AMHSERFEVP AATAAAINAT RRDGGRVVAV GTTVVRTLEY VARTCGEIRA FSGACDLFIY PGYNFQAIAA MITNFHLPRS TLLMLVSAFT GREKVLAAYE AAIQEKYRFY SYGDAMLIE
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